Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02409 ATGCTAAGTTCTAAAGTTGGAACTTTCTTGCAGACTAGAGGCATGCACACTCTTATTCGTGATAAGGAAATATCAAAGCATGACTTTGTTTTTTATTCAGATAAGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAACAAGTTACCACACCTACAGGATCAATTTATATTGGAGTTGATTTTTGTAAGAAATTGTGTGGAGTATCTGTTATTTGA 237 0.346 MLSSKVGTFLQTRGMHTLIRDKEISKHDFVFYSDKLIRLVVEHGLGYLPFTEKQVTTPTGSIYIGVDFCKKLCGVSVI 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02409 78 SUPERFAMILY PRTase-like 11 77 IPR029057 -
Trre3g02409 78 Pfam Uracil phosphoribosyltransferase 11 78 - -
Trre3g02409 78 Gene3D - 6 78 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02409 Trre-Chr3 23103251 23103733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02409 6 78 PRT Gene Family AT3G27190 83.562 1.95e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02409 K00876 - qsu:112035544 132.88