Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02390 ATGGGTGTTGTTAGAATCCTCTCTTCAGATACAATCAAGGCATCAAAATCAAGTAATCAAATAATTGATTTAACTCCATGGGATCTTCAGTTTCTAACTGCTTCACCCAACAAAAAGGGTCTTCTTTATCATCATCAAGTAGTAGTAAACCAAATCGAACGGCTGAGACACTCTTTATCCTCTTCTCTTGCCTTTTTTCAAACTCTAGCCGGCCGTCTTGAAATAACGGAACACGAAGACAATGTTTCTTCGTGTTCCATAAAATGCAACAATGTAGGTGTACTTTTTATCCATGCAGCGGCAGAGAATACATGTGTTGCTGACATTGTTAGACCCACTTATGTTCCTTCCATTGTTGATTCATTTTTTGCTTTTAACGGAGTTAGAAACTACGAAGGCACGTCACAACCATTGTTGGCAGTGCAAGTCACGGAGCTAGTTGACGGCATTTTCATTGGTTGTACATTCAACCATGTGGCTGTTGACGGAAATTCCATGTGGCATTTCATTAATTCATGGGCCGAAATTTCACGCGGTTCTTGTGATCAAATATCCAAACCTCCAATACTTGAGCATTGGTTTCCAAATGGTATTCGATGTCCCATACAATTTCCATTCACTATGGAGTCACAAAATAATCCCTCTGATGCACCGAGTTTTTCATCATCTGATGAAGAAAAACTCTATATATCAGAGAGGTTATTCCATTTCAAAAAGGAGAAAATCGTTCAACTAAAATCGAAAGTCAATGCAGTGATTGGTAGTAGTACTAATAAAATATCTTCTTTACAAGCGCTTTTAACTCACCTTTGGTGTTCTGTGATCCGTTCCAAACAACTTGACTCACAAGAAGAAGTCCATCTTATGTTGATGATAGGAGTTAGACCAAGATTTGTTCCACCATTGCTAGAAGATTATTTTGGAAATGCAATTATAGGTGGTGGGATTAAAATGAAAGTTGGGGAGTTGTTAGAGGAAGGTGGACAATGTAAAGGTGCTTTGGAGATGAATAAGTTAATTGCTACATACTCTAATGAGATGTTGAAGAATCACTATGAGTCTTGGTTGAAAAATCCAAGTTTTGTTAGGCTTGCTAGCATGACAAATAATAATTTCTTGGCCATTGGCCATTCACCTTGGTTTGATGTTTATGGCAATGATTTTGGATGGGGAAAGCCAGTGGCAGTTCACAATGGAAATAAAATAAATGGTTTAGTTAATGTGTTTGCTGGAATAGAAGAAGGTAGTATTGATCTTAGAGTGTGTCTTCCTTACAAGAATTTGGAGGCAATGGGAAATGACCCTCAATTTATGGCTATTGTTTCCAACTAA 1332 0.3776 MGVVRILSSDTIKASKSSNQIIDLTPWDLQFLTASPNKKGLLYHHQVVVNQIERLRHSLSSSLAFFQTLAGRLEITEHEDNVSSCSIKCNNVGVLFIHAAAENTCVADIVRPTYVPSIVDSFFAFNGVRNYEGTSQPLLAVQVTELVDGIFIGCTFNHVAVDGNSMWHFINSWAEISRGSCDQISKPPILEHWFPNGIRCPIQFPFTMESQNNPSDAPSFSSSDEEKLYISERLFHFKKEKIVQLKSKVNAVIGSSTNKISSLQALLTHLWCSVIRSKQLDSQEEVHLMLMIGVRPRFVPPLLEDYFGNAIIGGGIKMKVGELLEEGGQCKGALEMNKLIATYSNEMLKNHYESWLKNPSFVRLASMTNNNFLAIGHSPWFDVYGNDFGWGKPVAVHNGNKINGLVNVFAGIEEGSIDLRVCLPYKNLEAMGNDPQFMAIVSN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02390 443 Gene3D - 3 200 IPR023213 -
Trre3g02390 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 438 - -
Trre3g02390 443 Pfam Transferase family 4 437 - -
Trre3g02390 443 Gene3D - 208 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02390 Trre-Chr3 22833798 22835129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02390 55 423 Monolignol Biosynthesis Gene Families AT5G48930 27.649 2.87e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02390 - - gmx:100797643 474.937