Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02365 ATGTGTATGACCATCGAAAATGAGCATCAGTTTTCATCATTTGCTGAAATTAATTCAACTAGGTCAAGTTGGAATTGTAGGGCAAAGATCATCCGACTTTGGCAAACTTCTAATTCCAATCGAAACACGTTGCCTTTTTCTATTGAAATGGTTTTAATGGATTCTTATGGTGGTAGAATTCATGCTACAGTTAAAACAACTCTTATTTATAAATTTAAGGATGAACTAATAAAGGGAAAAGTTTATACTTTTGAAAAGATGGGAGTCTCACCTAATGTTGGAGCTTATCGTACCACTCTTCACAGTTTTAAGTTAAATTTCAAAGCCACTACATTGGTTCAAAGACTTTTTAATCAAGACATTGTTAGATCTCCATATAACTTTGTTCCAATTGGACAGATTGTAGGAGGCTCTTATGACACTAATTTCTTAGTTGATGTTATTGGAATATTGATTGATGTTGGTCGTGAGCGTGAAATTAATGATCAAGATGGAACGCCCACAAAAGTGAATGTCATTGAAATAGAGCAAGATGGGAGTAAGATTCAATGTTATTTGTATGGGGCATATGTTGATGTACTTAATGCGTTTCTTGGAGCTGGACATGTCCAAATTGTTGCTGTCGTTATGATGTTTGCCAAGGCCGTAGCTTTTCAAGGCAAGATTCATATTCAAAATTGTCTCAACTCTACCTATTTGTCCTTTAACCCTTTCTAA 717 0.3487 MCMTIENEHQFSSFAEINSTRSSWNCRAKIIRLWQTSNSNRNTLPFSIEMVLMDSYGGRIHATVKTTLIYKFKDELIKGKVYTFEKMGVSPNVGAYRTTLHSFKLNFKATTLVQRLFNQDIVRSPYNFVPIGQIVGGSYDTNFLVDVIGILIDVGREREINDQDGTPTKVNVIEIEQDGSKIQCYLYGAYVDVLNAFLGAGHVQIVAVVMMFAKAVAFQGKIHIQNCLNSTYLSFNPF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02365 238 SUPERFAMILY Nucleic acid-binding proteins 126 231 IPR012340 -
Trre3g02365 238 Gene3D - 9 115 IPR012340 -
Trre3g02365 238 Pfam Domain of unknown function DUF223 49 144 IPR003871 -
Trre3g02365 238 CDD RPA1_DBD_A_like 27 113 - -
Trre3g02365 238 CDD RPA1_DBD_B_like 146 237 - -
Trre3g02365 238 SUPERFAMILY Nucleic acid-binding proteins 10 117 IPR012340 -
Trre3g02365 238 Gene3D - 119 238 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02365 Trre-Chr3 22353035 22354017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02365 3 237 Core DNA Replication Machinery Family AT2G06510 22.267 4.19e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02365 - - tpra:123915358 296.975