Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02359 ATGGGGGTTGTTTTGCAAATTGTTATGCTGCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAATGGACAGTCATCGAGAAGCAGTGCTTCAAGCCCTTCAGATCCAGATGGGTCTGTCATATCGCCATCTCCATCAACATTACCTACGGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATCTTTCTTGCAACCACCAGTTGCATTACCACCTTCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCCAGTCCTAGTCCAAACACCAAATCCTTATCGCCGCCACCGTATAAGACTGTTTCGGCACCATCAACTGCTGAAATGAATTTTCCACCATCCATGCAACCAATTCCACCTCAAAGGAAAACACCCATTGTTAGGCCTCCTATATCAACACCAACTGCTTCAGCTCCTGTTGCAATACCTCCTGAAAATTTGCCTAAAACTTCACCTATCAGCCAACCAATTAAACATGGAAGTGTGCCTCCTGAGGTTGATAAGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACCAGGATTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAAATGAATCATCCGTATCACCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGCTGTTCCAGAGCCATCAACTGTTGAGAGGAATTTTCCACCATCCGTGCAACCAATTCCACCTCAAAAGACAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAACGTTGATCGGAGGAATGAAAGTAAGAGTCATAACCTAGAGCCAATTTCACCAGGGTCTTTCTTGCACACTCCAGTTGCATTGCCACCTCCAACATCAGCTCCAATTCCTCAGAAGATTAAAGGAACTGAATCATCCATATCACCTAGTCCCAGTCCGAGCACCAAATCGTTATCCCTGCCATATAAGGCTGTTCCGGAGCCATCAATGTCTGAAAGGAATTTCCCACCATCTATGCAACCAATTCCACCCCAAAAGAAAATACCTATTGTAAGGCCTCCTATATCCACACCAACCGCTCCAGCTCCTGTAACAGTGCCTCCTGGAGATTTGCCTAGGCCTCCTATATCCATACCAACTGCTCCAGCTCCTGTAACAATACCTCCAGGAGATTTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAAGGATGGTAGGAGGAATGAAAGTACGAATCATAACCCAAAGCCAGTTTCACCAGCGCCTGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTTCCGCCTAATGCTCATAGTAATGGTACAAATACAAATAAACCTCACCTCCCAGAGCCAATTTCACCAGCCCCTGCATTGAATTTGCCAAAATATTCGCCAGTGAGTCAGCCAACTGAACCTGGAAGTTTGCCTCCTACTGTCCATAGAAGGAATTCCAGTATCAGGCACACATTGGAGCCGGTTTCACAAGCCCCGGTTGCAGAACCTCCTACAAAGTTTCCAAAAAATTCACCAGTCAGCCAACCAACTCGTCTTGGAAGTTTTCCACCTAATGTTCATAATAAAACTGTACATAAGGGACACACTCCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGCAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGTAGATAAAACAAGGCCATTACACCATGCTCCTGAGCCATTGATTTCACCACCTATATCTCCTTTCAACAAAGATCATTCTCCTGCATCTTCACCTTCTACAGCATTTTATAAGCATCACCATACAAGGAAGACGATAATCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGGTTCGGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGCGACCCAGGTTTCGCCTGCTCCTTCTCCATCATTTGTGACTTTCCCTCACTCCACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGGCCTTTTTTGAGGAACCCTAAGAAGCCAATCCAAGCATTGCCACCTCCACCTCCCAATGAAGATTGTTTATCATTTATTTGCTCGGAGCCTTTGACAAATTCACCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAAATTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCTTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCGGCTTTTCTAGCAATTGTTTTATGCTCAGCTGCTGTTTTTGCCTTATCCAAATTCAGAGATCGTGTGCCTGAGTCTCAACCAACATCAACCCCACGGGCTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCGTATGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGCGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTTGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTGCTTGAGCTTTTGACAGGAAGAAAACCTGTGGATTTTTCACAACCACCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGAACCAATGTCCCATTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAACAAATTCTAGCCAGAAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACAACCAGATAGTTTCCGAGGCCATTTCGCAGCTGCTAATTACGATTACGGAGTTGATATAGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACAGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTAAGTGAACACGGAGTTATGTTCAAGTAA 4455 0.4382 MGVVLQIVMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHNGQSSRSSASSPSDPDGSVISPSPSTLPTDPSPSKAPSLLHPNGSFLQPPVALPPSTSAPTPQKIKGIESSISPSPSPNTKSLSPPPYKTVSAPSTAEMNFPPSMQPIPPQRKTPIVRPPISTPTASAPVAIPPENLPKTSPISQPIKHGSVPPEVDKRNESKSHNLEPVSPGFLLHPPVALPPPTSAPIPQKIKGNESSVSPSPSTISLSPPYKAVPEPSTVERNFPPSVQPIPPQKTIPIVRPPISTPTAPAPVAIPPGNVPKTSPISQPIDHGSLPPNVDRRNESKSHNLEPISPGSFLHTPVALPPPTSAPIPQKIKGTESSISPSPSPSTKSLSLPYKAVPEPSMSERNFPPSMQPIPPQKKIPIVRPPISTPTAPAPVTVPPGDLPRPPISIPTAPAPVTIPPGDLPKTSPISQPIEHGSLPPKDGRRNESTNHNPKPVSPAPVATPSTNEPKISPISHSTNNGSFPPNAHSNGTNTNKPHLPEPISPAPALNLPKYSPVSQPTEPGSLPPTVHRRNSSIRHTLEPVSQAPVAEPPTKFPKNSPVSQPTRLGSFPPNVHNKTVHKGHTPEPVMPPPTSTFPADPPLAHPVIPAASPHELPAPVISPSLTPSRRFNGKNGGEPVSAPLYKTPKSPPAIVHSPAQAPSVDKTRPLHHAPEPLISPPISPFNKDHSPASSPSTAFYKHHHTRKTIISPAPASSYFVSPPTSKHQGSADSPFTFPIQSPATQVSPAPSPSFVTFPHSTKIPFHPPKESPLRPFLRNPKKPIQALPPPPPNEDCLSFICSEPLTNSPPGVPCMCVWPMRVGLRLNVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALIDLVPLGEEFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAAVFALSKFRDRVPESQPTSTPRAFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTNSSQKELSSDFITASEQQPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRTGRSKRLWQIIRNLSGGSVSEHGVMFK 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02359 1484 ProSitePatterns Protein kinases ATP-binding region signature. 1103 1125 IPR017441 GO:0005524
Trre3g02359 1484 MobiDBLite consensus disorder prediction 279 316 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 804 829 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 553 581 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 407 465 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 1037 1057 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 752 792 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 242 261 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 226 240 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 38 626 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 368 389 - -
Trre3g02359 1484 Gene3D Phosphorylase Kinase; domain 1 1069 1172 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 502 538 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 108 152 - -
Trre3g02359 1484 FunFam Receptor-like serine/threonine-protein kinase ALE2 1173 1392 - -
Trre3g02359 1484 Pfam Protein tyrosine and serine/threonine kinase 1100 1370 IPR001245 GO:0004672|GO:0006468
Trre3g02359 1484 MobiDBLite consensus disorder prediction 153 167 - -
Trre3g02359 1484 ProSiteProfiles Protein kinase domain profile. 1097 1373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02359 1484 CDD STKc_IRAK 1103 1371 - -
Trre3g02359 1484 MobiDBLite consensus disorder prediction 50 75 - -
Trre3g02359 1484 Gene3D Transferase(Phosphotransferase) domain 1 1173 1397 - -
Trre3g02359 1484 PANTHER OS01G0750732 PROTEIN 827 1396 - -
Trre3g02359 1484 FunFam receptor-like serine/threonine-protein kinase ALE2 1070 1172 - -
Trre3g02359 1484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1219 1231 IPR008271 GO:0004672|GO:0006468
Trre3g02359 1484 SUPERFAMILY Protein kinase-like (PK-like) 1078 1370 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02359 Trre-Chr3 22214560 22225268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02359 417 1484 Receptor kinase-like Gene Family AT5G56890 48.887 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre3g02359 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02359 - - psat:127136544 1976.06