Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02358 ATGGGGGTTGTTTTGCAAATTGTTATGCTGCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAATGGACAGTCATCGAGAAGCAGTGCTTCAAGCCCTTCAGATCCAGATGGGTCTGTCATATCGCCATCTCCATCAACATTACCTACGGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATCTTTCTTGCAACCACCAGTTGCATTACCACCTTCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCCAGTCCTAGTCCAAACACCAAATCCTTATCGCCGCCACCGTATAAGACTGTTTCGGCACCATCAACTGCTGAAATGAATTTTCCACCATCCATGCAACCAATTCCACCTCAAAGGAAAACACCCATTGTTAGGCCTCCTATATCAACACCAACTGCTTCAGCTCCTGTTGCAATACCTCCTGAAAATTTGCCTAAAACTTCACCTATCAGCCAACCAATTAAACATGGAAGTGTGCCTCCTGAGGTTGATAAGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACCAGGATTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAAATGAATCATCCGTATCACCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGCTGTTCCAGAGCCATCAACTGTTGAGAGGAATTTTCCACCATCCGTGCAACCAATTCCACCTCAAAAGACAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAACGTTGATCGGAGGAATGAAAGTAAGAGTCATAACCTAGAGCCAATTTCACCAGGGTCTTTCTTGCACACTCCAGTTGCATTGCCACCTCCAACATCAGCTCCAATTCCTCAGAAGATTAAAGGAACTGAATCATCCATATCACCTAGTCCCAGTCCGAGCACCAAATCGTTATCCCTGCCATATAAGGCTGTTCCGGAGCCATCAATGTCTGAAAGGAATTTCCCACCATCTATGCAACCAATTCCACCCCAAAAGAAAATACCTATTGTAAGGCCTCCTATATCCACACCAACCGCTCCAGCTCCTGTAACAATACCTCCAGGAGATTTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAAGGATGGTAGGAGGAATGAAAGTACGAATCATAACCCAAAGCCAGTTTCACCAGCGCCTGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTTCCGCCTAATGCTCATAGTAATGGTACAAATACAAATAAACCTCACCTCCCAGAGCCAATTTCACCAGCCCCTGCATTGAATTTGCCAAAATATTCGCCAGTGAGTCAGCCAACTGAACCTGGAAGTTTGCCTCCTACTGTCCATAGAAGGAATTCCAGTATCAGGCACACATTGGAGCCGGTTTCACAAGCCCCGGTTGCAGAACCTCCTACAAAGTTTCCAAAAAATTCACCAGTCAGCCAACCAACTCGTCTTGGAAGTTTTCCACCTAATGTTCATAATAAAACTGTACATAAGGGACACACTCCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGCAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGTAGATAAAACAAGGCCATTACACCATGCTCCTGAGCCATTGATTTCACCACCTATATCTCCTTTCAACAAAGATCATTCTCCTGCATCTTCACCTTCTACAGCATTTTATAAGCATCACCATACAAGGAAGACGATAATCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGGTTCGGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGCGACCCAGGTTTCGCCTGCTCCTTCTCCATCATTTGTGACTTTCCCTCACTCCACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGGCCTTTTTTGAGGAACCCTAAGAAGCCAATCCAAGCATTGCCACCTCCACCTCCCAATGAAGATTGTTTATCATTTATTTGCTCGGAGCCTTTGACAAATTCACCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAAATTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCTTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCGGCTTTTCTAGCAATTGTTTTATGCTCAGCTGCTGTTTTTGCCTTATCCAAATTCAGAGATCGTGTGCCTGAGTCTCAACCAACATCAACCCCACGGGCTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCGTATGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGCGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTTGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTGCTTGAGCTTTTGACAGGAAGAAAACCTGTGGATTTTTCACAACCACCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGAACCAATGTCCCATTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAACAAATTCTAGCCAGAAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACAACCAGATAGTTTCCGAGGCCATTTCGCAGCTGCTAATTACGATTACGGAGTTGATATAGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACAGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTAAGTGAACACGGAGTTATGTTCAAGTAA 4392 0.4369 MGVVLQIVMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHNGQSSRSSASSPSDPDGSVISPSPSTLPTDPSPSKAPSLLHPNGSFLQPPVALPPSTSAPTPQKIKGIESSISPSPSPNTKSLSPPPYKTVSAPSTAEMNFPPSMQPIPPQRKTPIVRPPISTPTASAPVAIPPENLPKTSPISQPIKHGSVPPEVDKRNESKSHNLEPVSPGFLLHPPVALPPPTSAPIPQKIKGNESSVSPSPSTISLSPPYKAVPEPSTVERNFPPSVQPIPPQKTIPIVRPPISTPTAPAPVAIPPGNVPKTSPISQPIDHGSLPPNVDRRNESKSHNLEPISPGSFLHTPVALPPPTSAPIPQKIKGTESSISPSPSPSTKSLSLPYKAVPEPSMSERNFPPSMQPIPPQKKIPIVRPPISTPTAPAPVTIPPGDLPKTSPISQPIEHGSLPPKDGRRNESTNHNPKPVSPAPVATPSTNEPKISPISHSTNNGSFPPNAHSNGTNTNKPHLPEPISPAPALNLPKYSPVSQPTEPGSLPPTVHRRNSSIRHTLEPVSQAPVAEPPTKFPKNSPVSQPTRLGSFPPNVHNKTVHKGHTPEPVMPPPTSTFPADPPLAHPVIPAASPHELPAPVISPSLTPSRRFNGKNGGEPVSAPLYKTPKSPPAIVHSPAQAPSVDKTRPLHHAPEPLISPPISPFNKDHSPASSPSTAFYKHHHTRKTIISPAPASSYFVSPPTSKHQGSADSPFTFPIQSPATQVSPAPSPSFVTFPHSTKIPFHPPKESPLRPFLRNPKKPIQALPPPPPNEDCLSFICSEPLTNSPPGVPCMCVWPMRVGLRLNVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALIDLVPLGEEFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAAVFALSKFRDRVPESQPTSTPRAFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTNSSQKELSSDFITASEQQPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRTGRSKRLWQIIRNLSGGSVSEHGVMFK 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02358 1463 MobiDBLite consensus disorder prediction 279 316 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 407 444 - -
Trre3g02358 1463 Gene3D Phosphorylase Kinase; domain 1 1048 1151 - -
Trre3g02358 1463 FunFam Receptor-like serine/threonine-protein kinase ALE2 1152 1371 - -
Trre3g02358 1463 CDD STKc_IRAK 1082 1350 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 731 771 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 242 261 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 226 240 - -
Trre3g02358 1463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1198 1210 IPR008271 GO:0004672|GO:0006468
Trre3g02358 1463 Pfam Protein tyrosine and serine/threonine kinase 1079 1349 IPR001245 GO:0004672|GO:0006468
Trre3g02358 1463 ProSiteProfiles Protein kinase domain profile. 1076 1352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02358 1463 MobiDBLite consensus disorder prediction 368 389 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 38 591 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 108 152 - -
Trre3g02358 1463 SUPERFAMILY Protein kinase-like (PK-like) 1057 1349 IPR011009 -
Trre3g02358 1463 Gene3D Transferase(Phosphotransferase) domain 1 1152 1376 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 783 808 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 153 167 - -
Trre3g02358 1463 ProSitePatterns Protein kinases ATP-binding region signature. 1082 1104 IPR017441 GO:0005524
Trre3g02358 1463 MobiDBLite consensus disorder prediction 532 560 - -
Trre3g02358 1463 PANTHER OS01G0750732 PROTEIN 806 1375 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 50 75 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 1016 1036 - -
Trre3g02358 1463 FunFam receptor-like serine/threonine-protein kinase ALE2 1049 1151 - -
Trre3g02358 1463 MobiDBLite consensus disorder prediction 481 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02358 Trre-Chr3 22214560 22225268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02358 417 1463 Receptor kinase-like Gene Family AT5G56890 49.055 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre3g02358 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02358 - - psat:127136544 1981.45