Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02357 ATGGGGGTTGTTTTGCAAATTGTTATGCTGCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAATGGACAGTCATCGAGAAGCAGTGCTTCAAGCCCTTCAGATCCAGATGGGTCTGTCATATCGCCATCTCCATCAACATTACCTACGGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATCTTTCTTGCAACCACCAGTTGCATTACCACCTTCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCCAGTCCTAGTCCAAACACCAAATCCTTATCGCCGCCACCGTATAAGACTGTTTCGGCACCATCAACTGCTGAAATGAATTTTCCACCATCCATGCAACCAATTCCACCTCAAAGGAAAACACCCATTGTTAGGCCTCCTATATCAACACCAACTGCTTCAGCTCCTGTTGCAATACCTCCTGAAAATTTGCCTAAAACTTCACCTATCAGCCAACCAATTAAACATGGAAGTGTGCCTCCTGAGGTTGATAAGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACCAGGATTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAAATGAATCATCCGTATCACCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGCTGTTCCAGAGCCATCAACTGTTGAGAGGAATTTTCCACCATCCGTGCAACCAATTCCACCTCAAAAGACAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAACGTTGATCGGAGGAATGAAAGTAAGAGTCATAACCTAGAGCCAATTTCACCAGGGTCTTTCTTGCACACTCCAGTTGCATTGCCACCTCCAACATCAGCTCCAATTCCTCAGAAGATTAAAGGAACTGAATCATCCATATCACCTAGTCCCAGTCCGAGCACCAAATCGTTATCCCTGCCATATAAGGCTGTTCCGGAGCCATCAATGTCTGAAAGGAATTTCCCACCATCTATGCAACCAATTCCACCCCAAAAGAAAATACCTATTGTAAGGCCTCCTATATCCACACCAACCGCTCCAGCTCCTGTAACAATACCTCCAGGAGATTTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAAGGATGGTAGGAGGAATGAAAGTACGAATCATAACCCAAAGCCAGTTTCACCAGCGCCTGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTTCCGCCTAATGCTCATAGTAATGCCCCTGCATTGAATTTGCCAAAATATTCGCCAGTGAGTCAGCCAACTGAACCTGGAAGTTTGCCTCCTACTGTCCATAGAAGGAATTCCAGTATCAGGCACACATTGGAGCCGGTTTCACAAGCCCCGGTTGCAGAACCTCCTACAAAGTTTCCAAAAAATTCACCAGTCAGCCAACCAACTCGTCTTGGAAGTTTTCCACCTAATGTTCATAATAAAACTGTACATAAGGGACACACTCCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGCAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGTAGATAAAACAAGGCCATTACACCATGCTCCTGAGCCATTGATTTCACCACCTATATCTCCTTTCAACAAAGATCATTCTCCTGCATCTTCACCTTCTACAGCATTTTATAAGCATCACCATACAAGGAAGACGATAATCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGGTTCGGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGCGACCCAGGTTTCGCCTGCTCCTTCTCCATCATTTGTGACTTTCCCTCACTCCACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGGCCTTTTTTGAGGAACCCTAAGAAGCCAATCCAAGCATTGCCACCTCCACCTCCCAATGAAGATTGTTTATCATTTATTTGCTCGGAGCCTTTGACAAATTCACCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAAATTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCTTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCGGCTTTTCTAGCAATTGTTTTATGCTCAGCTGCTGTTTTTGCCTTATCCAAATTCAGAGATCGTGTGCCTGAGTCTCAACCAACATCAACCCCACGGGCTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCGTATGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGCGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTTGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTGCTTGAGCTTTTGACAGGAAGAAAACCTGTGGATTTTTCACAACCACCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGAACCAATGTCCCATTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAACAAATTCTAGCCAGAAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACAACCAGATAGTTTCCGAGGCCATTTCGCAGCTGCTAATTACGATTACGGAGTTGATATAGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACAGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTAAGTGAACACGGAGTTATGTTCAAGTAA 4347 0.4371 MGVVLQIVMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHNGQSSRSSASSPSDPDGSVISPSPSTLPTDPSPSKAPSLLHPNGSFLQPPVALPPSTSAPTPQKIKGIESSISPSPSPNTKSLSPPPYKTVSAPSTAEMNFPPSMQPIPPQRKTPIVRPPISTPTASAPVAIPPENLPKTSPISQPIKHGSVPPEVDKRNESKSHNLEPVSPGFLLHPPVALPPPTSAPIPQKIKGNESSVSPSPSTISLSPPYKAVPEPSTVERNFPPSVQPIPPQKTIPIVRPPISTPTAPAPVAIPPGNVPKTSPISQPIDHGSLPPNVDRRNESKSHNLEPISPGSFLHTPVALPPPTSAPIPQKIKGTESSISPSPSPSTKSLSLPYKAVPEPSMSERNFPPSMQPIPPQKKIPIVRPPISTPTAPAPVTIPPGDLPKTSPISQPIEHGSLPPKDGRRNESTNHNPKPVSPAPVATPSTNEPKISPISHSTNNGSFPPNAHSNAPALNLPKYSPVSQPTEPGSLPPTVHRRNSSIRHTLEPVSQAPVAEPPTKFPKNSPVSQPTRLGSFPPNVHNKTVHKGHTPEPVMPPPTSTFPADPPLAHPVIPAASPHELPAPVISPSLTPSRRFNGKNGGEPVSAPLYKTPKSPPAIVHSPAQAPSVDKTRPLHHAPEPLISPPISPFNKDHSPASSPSTAFYKHHHTRKTIISPAPASSYFVSPPTSKHQGSADSPFTFPIQSPATQVSPAPSPSFVTFPHSTKIPFHPPKESPLRPFLRNPKKPIQALPPPPPNEDCLSFICSEPLTNSPPGVPCMCVWPMRVGLRLNVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALIDLVPLGEEFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAAVFALSKFRDRVPESQPTSTPRAFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTNSSQKELSSDFITASEQQPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRTGRSKRLWQIIRNLSGGSVSEHGVMFK 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02357 1448 Pfam Protein tyrosine and serine/threonine kinase 1064 1334 IPR001245 GO:0004672|GO:0006468
Trre3g02357 1448 MobiDBLite consensus disorder prediction 279 316 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 407 444 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 514 545 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 38 578 - -
Trre3g02357 1448 FunFam Receptor-like serine/threonine-protein kinase ALE2 1137 1356 - -
Trre3g02357 1448 SUPERFAMILY Protein kinase-like (PK-like) 1042 1334 IPR011009 -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 242 261 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 226 240 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 368 389 - -
Trre3g02357 1448 PANTHER OS01G0750732 PROTEIN 791 1360 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 768 793 - -
Trre3g02357 1448 CDD STKc_IRAK 1067 1335 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 108 152 - -
Trre3g02357 1448 ProSiteProfiles Protein kinase domain profile. 1061 1337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02357 1448 MobiDBLite consensus disorder prediction 716 756 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 153 167 - -
Trre3g02357 1448 FunFam receptor-like serine/threonine-protein kinase ALE2 1034 1136 - -
Trre3g02357 1448 ProSitePatterns Protein kinases ATP-binding region signature. 1067 1089 IPR017441 GO:0005524
Trre3g02357 1448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1183 1195 IPR008271 GO:0004672|GO:0006468
Trre3g02357 1448 MobiDBLite consensus disorder prediction 1001 1021 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 50 75 - -
Trre3g02357 1448 Gene3D Phosphorylase Kinase; domain 1 1033 1136 - -
Trre3g02357 1448 Gene3D Transferase(Phosphotransferase) domain 1 1137 1361 - -
Trre3g02357 1448 MobiDBLite consensus disorder prediction 481 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02357 Trre-Chr3 22214560 22225268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02357 417 1448 Receptor kinase-like Gene Family AT5G56890 49.909 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre3g02357 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02357 - - psat:127136544 1951.02