Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02356 ATGGGGGTTGTTTTGCAAATTGTTATGCTGCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAATGGACAGTCATCGAGAAGCAGTGCTTCAAGCCCTTCAGATCCAGATGGGTCTGTCATATCGCCATCTCCATCAACATTACCTACGGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATCTTTCTTGCAACCACCAGTTGCATTACCACCTTCTACATCAGCTCCAACTCCTCAGAAGATTAAAGGAATTGAATCATCCATATCACCCAGTCCTAGTCCAAACACCAAATCCTTATCGCCGCCACCGTATAAGACTGTTTCGGCACCATCAACTGCTGAAATGAATTTTCCACCATCCATGCAACCAATTCCACCTCAAAGGAAAACACCCATTGTTAGGCCTCCTATATCAACACCAACTGCTTCAGCTCCTGTTGCAATACCTCCTGAAAATTTGCCTAAAACTTCACCTATCAGCCAACCAATTAAACATGGAAGTGTGCCTCCTGAGGTTGATAAGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACCAGGATTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAAATGAATCATCCGTATCACCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGCTGTTCCAGAGCCATCAACTGTTGAGAGGAATTTTCCACCATCCGTGCAACCAATTCCACCTCAAAAGACAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAACGTTGATCGGAGGAATGAAAGTAAGAGTCATAACCTAGAGCCAATTTCACCAGCGCCTGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTTCCGCCTAATGCTCATAGTAATGGTACAAATACAAATAAACCTCACCTCCCAGAGCCAATTTCACCAGCCCCTGCATTGAATTTGCCAAAATATTCGCCAGTGAGTCAGCCAACTGAACCTGGAAGTTTGCCTCCTACTGTCCATAGAAGGAATTCCAGTATCAGGCACACATTGGAGCCGGTTTCACAAGCCCCGGTTGCAGAACCTCCTACAAAGTTTCCAAAAAATTCACCAGTCAGCCAACCAACTCGTCTTGGAAGTTTTCCACCTAATGTTCATAATAAAACTGTACATAAGGGACACACTCCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGCAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGTAGATAAAACAAGGCCATTACACCATGCTCCTGAGCCATTGATTTCACCACCTATATCTCCTTTCAACAAAGATCATTCTCCTGCATCTTCACCTTCTACAGCATTTTATAAGCATCACCATACAAGGAAGACGATAATCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGGTTCGGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGCGACCCAGGTTTCGCCTGCTCCTTCTCCATCATTTGTGACTTTCCCTCACTCCACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGGCCTTTTTTGAGGAACCCTAAGAAGCCAATCCAAGCATTGCCACCTCCACCTCCCAATGAAGATTGTTTATCATTTATTTGCTCGGAGCCTTTGACAAATTCACCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAAATTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCTTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCGGCTTTTCTAGCAATTGTTTTATGCTCAGCTGCTGTTTTTGCCTTATCCAAATTCAGAGATCGTGTGCCTGAGTCTCAACCAACATCAACCCCACGGGCTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCGTATGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGCGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTTGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTGCTTGAGCTTTTGACAGGAAGAAAACCTGTGGATTTTTCACAACCACCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGAACCAATGTCCCATTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAACAAATTCTAGCCAGAAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACAACCAGATAGTTTCCGAGGCCATTTCGCAGCTGCTAATTACGATTACGGAGTTGATATAGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACAGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTAAGTGAACACGGAGTTATGTTCAAGTAA 4008 0.4351 MGVVLQIVMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHNGQSSRSSASSPSDPDGSVISPSPSTLPTDPSPSKAPSLLHPNGSFLQPPVALPPSTSAPTPQKIKGIESSISPSPSPNTKSLSPPPYKTVSAPSTAEMNFPPSMQPIPPQRKTPIVRPPISTPTASAPVAIPPENLPKTSPISQPIKHGSVPPEVDKRNESKSHNLEPVSPGFLLHPPVALPPPTSAPIPQKIKGNESSVSPSPSTISLSPPYKAVPEPSTVERNFPPSVQPIPPQKTIPIVRPPISTPTAPAPVAIPPGNVPKTSPISQPIDHGSLPPNVDRRNESKSHNLEPISPAPVATPSTNEPKISPISHSTNNGSFPPNAHSNGTNTNKPHLPEPISPAPALNLPKYSPVSQPTEPGSLPPTVHRRNSSIRHTLEPVSQAPVAEPPTKFPKNSPVSQPTRLGSFPPNVHNKTVHKGHTPEPVMPPPTSTFPADPPLAHPVIPAASPHELPAPVISPSLTPSRRFNGKNGGEPVSAPLYKTPKSPPAIVHSPAQAPSVDKTRPLHHAPEPLISPPISPFNKDHSPASSPSTAFYKHHHTRKTIISPAPASSYFVSPPTSKHQGSADSPFTFPIQSPATQVSPAPSPSFVTFPHSTKIPFHPPKESPLRPFLRNPKKPIQALPPPPPNEDCLSFICSEPLTNSPPGVPCMCVWPMRVGLRLNVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALIDLVPLGEEFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAAVFALSKFRDRVPESQPTSTPRAFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTNSSQKELSSDFITASEQQPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRTGRSKRLWQIIRNLSGGSVSEHGVMFK 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02356 1335 CDD STKc_IRAK 954 1222 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 309 463 - -
Trre3g02356 1335 FunFam receptor-like serine/threonine-protein kinase ALE2 921 1023 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 349 389 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 603 643 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 242 261 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 226 240 - -
Trre3g02356 1335 FunFam Receptor-like serine/threonine-protein kinase ALE2 1024 1243 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 108 152 - -
Trre3g02356 1335 Gene3D Phosphorylase Kinase; domain 1 920 1023 - -
Trre3g02356 1335 ProSiteProfiles Protein kinase domain profile. 948 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02356 1335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1070 1082 IPR008271 GO:0004672|GO:0006468
Trre3g02356 1335 PANTHER OS01G0750732 PROTEIN 678 1247 - -
Trre3g02356 1335 Pfam Protein tyrosine and serine/threonine kinase 951 1221 IPR001245 GO:0004672|GO:0006468
Trre3g02356 1335 Gene3D Transferase(Phosphotransferase) domain 1 1024 1248 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 153 167 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 38 263 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 404 432 - -
Trre3g02356 1335 SUPERFAMILY Protein kinase-like (PK-like) 929 1221 IPR011009 -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 50 75 - -
Trre3g02356 1335 MobiDBLite consensus disorder prediction 888 908 - -
Trre3g02356 1335 ProSitePatterns Protein kinases ATP-binding region signature. 954 976 IPR017441 GO:0005524
Trre3g02356 1335 MobiDBLite consensus disorder prediction 655 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02356 Trre-Chr3 22214560 22225268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02356 423 1335 Receptor kinase-like Gene Family AT5G56890 53.002 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre3g02356 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02356 - - psat:127136544 2119.35