Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02355 ATGGGGGTTGTTTTGCAAATTGTTATGCTGCTTTTTGTTATTGGTTTTGTTGTTGCAGCTCAAGGATCTGAAGGGTCTATTATATCCCCATCTCCGGCATTTCTTCCTGCTGTTCAGCCTGATGGAGAAGCACCTGATGGTCTTATCCATAATGGACAGTCATCGAGAAGCAGTGCTTCAAGCCCTTCAGATCCAGATGGGTCTGTCATATCGCCATCTCCATCAACATTACCTACGGATCCTTCCCCTAGTAAAGCACCAAGTCTCTTACATCCAAATGGATTTTTGTTGCACCCTCCAGTTGCATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGATTAAAGGAAATGAATCATCCGTATCACCTAGTCCAAGCACCATATCGTTATCGCCACCATATAAGGCTGTTCCAGAGCCATCAACTGTTGAGAGGAATTTTCCACCATCCGTGCAACCAATTCCACCTCAAAAGACAATACCTATTGTTAGGCCTCCTATATCCACACCAACTGCTCCAGCTCCTGTTGCAATACCTCCTGGAAATGTGCCTAAAACTTCTCCTATCAGCCAACCAATTGATCATGGAAGTTTGCCTCCTAACGTTGATCGGAGGAATGAAAGTAAGAGTCATAACCTAGAGCCAATTTCACCAGGGTCTTTCTTGCACACTCCAGTTGCATTGCCACCTCCAACATCAGCTCCAATTCCTCAGAAGATTAAAGGAACTGAATCATCCATATCACCTAGTCCCAGTCCGAGCACCAAATCGTTATCCCTGCCATATAAGGCTGTTCCGGAGCCATCAATGTCTGAAAGGAATTTCCCACCATCTATGCAACCAATTCCACCCCAAAAGAAAATACCTATTGTAAGGCCTCCTATATCCACACCAACCGCTCCAGCTCCTGTAACAATACCTCCAGGAGATTTGCCTAAAACTTCTCCTATCAGCCAACCAATTGAACATGGAAGTTTGCCTCCTAAGGATGGTAGGAGGAATGAAAGTACGAATCATAACCCAAAGCCAGTTTCACCAGCGCCTGTTGCAACACCTTCTACCAATGAGCCCAAAATTTCACCAATAAGCCATTCAACTAATAATGGAAGTTTTCCGCCTAATGCTCATAGTAATGGTACAAATACAAATAAACCTCACCTCCCAGAGCCAATTTCACCAGCCCCTGCATTGAATTTGCCAAAATATTCGCCAGTGAGTCAGCCAACTGAACCTGGAAGTTTGCCTCCTACTGTCCATAGAAGGAATTCCAGTATCAGGCACACATTGGAGCCGGTTTCACAAGCCCCGGTTGCAGAACCTCCTACAAAGTTTCCAAAAAATTCACCAGTCAGCCAACCAACTCGTCTTGGAAGTTTTCCACCTAATGTTCATAATAAAACTGTACATAAGGGACACACTCCAGAGCCAGTAATGCCACCACCAACAAGTACATTTCCAGCAGATCCGCCATTGGCCCACCCAGTCATACCAGCAGCATCTCCACATGAATTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCAAGAAGATTCAATGGGAAAAACGGTGGAGAACCTGTTTCTGCGCCTTTGTACAAAACACCAAAGTCACCACCAGCTATAGTTCATTCCCCTGCTCAAGCTCCTTCTGTAGATAAAACAAGGCCATTACACCATGCTCCTGAGCCATTGATTTCACCACCTATATCTCCTTTCAACAAAGATCATTCTCCTGCATCTTCACCTTCTACAGCATTTTATAAGCATCACCATACAAGGAAGACGATAATCAGCCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGGTTCGGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGCGACCCAGGTTTCGCCTGCTCCTTCTCCATCATTTGTGACTTTCCCTCACTCCACCAAAATTCCATTTCATCCTCCTAAAGAATCTCCTTTGCGGCCTTTTTTGAGGAACCCTAAGAAGCCAATCCAAGCATTGCCACCTCCACCTCCCAATGAAGATTGTTTATCATTTATTTGCTCGGAGCCTTTGACAAATTCACCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAATGTTCCTCTGTATACCTTCTTCCCTTTAGTTTCAGAGCTTGCTTCTGAAATAGCCACCGGAGTTTTCATGAAACCAAGTCAAGTTCGTATTATGGGGGCCAATACAGCAACTGACCTGCCAGATAAAACTGATGCCCTCATTGATTTGGTACCACTTGGGGAAGAATTTGACAACACTACAGCCTTTATAGCTTCTGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAAATTCTTACTTTGGAGATTATGAAGTGTTATATGTAAGCTATCCAGGTTTACCTCCATCTCCTCCATTACCACCTTCAAGTGTTAACATGATAGATGGTGGTCCTTATTCAAATAATGGCAATAATGGTAGGACAATAAAGCCTCTTGGGGTTGACATACAGAAGAAGCAGCATAAAAGTGGACTTAGCAAGGGCATTATAGCTATTATTGCTCTTTCGGCTTTTCTAGCAATTGTTTTATGCTCAGCTGCTGTTTTTGCCTTATCCAAATTCAGAGATCGTGTGCCTGAGTCTCAACCAACATCAACCCCACGGGCTTTTCCTCCGTCTCTTGTCAAAGCACCAGGTACTGCTGGGCCATCAGTTGCTTCAGCTTCAACATCATTTCGATCTAGCATTGCTGCGTATGCAGGATCTGCTAAGACTTTCAGTATGAATGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGGCTTGTTTATAGCGGTAACCTTGAAGATGGGTCAAAAGTAGCATTCAAAGTTCTAAAGAGGGAGGATCATCACGGCGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTAAAGTTGATCGGTATATGTACAGAACTCAGCTTCCGCTGTCTGGTTTATGAACTCATTCCAAATGGCAGTGTGGAATCCCATTTACATGGAGTTGATAGGGAAAAAAGCCCACTTGATTGGAGTACTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTCGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAATCTAGCAATATCTTACTTGAAAATGATTTTACACCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAGCTGATGAGGATAATAGGCACATATCGACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCTGAGTACGCAATGACTGGACATCTTCTCGTGAAAAGTGATGTATACAGCTACGGTGTTGTTCTGCTTGAGCTTTTGACAGGAAGAAAACCTGTGGATTTTTCACAACCACCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCGCTCCTCACAAGTAGAGAAGGACTGGAAGCGTTAATCGATCCATCTCTAGGAACCAATGTCCCATTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTGAAACTTGTTTGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAACAAATTCTAGCCAGAAAGAGTTATCTTCTGATTTCATTACTGCTTCTGAACAACAACCAGATAGTTTCCGAGGCCATTTCGCAGCTGCTAATTACGATTACGGAGTTGATATAGAAAATGGATTGGCAGCATCAGAGTTATTCAGCTCATCAGCAAGATTTGGAAGACAAGTATCTGGATCATTTAGAAGACATTCATATTCAGGTCCTCTAAGAACAGGAAGAAGCAAGCGGTTATGGCAGATAATTCGAAACCTTTCTGGCGGTAGTGTAAGTGAACACGGAGTTATGTTCAAGTAA 4005 0.4367 MGVVLQIVMLLFVIGFVVAAQGSEGSIISPSPAFLPAVQPDGEAPDGLIHNGQSSRSSASSPSDPDGSVISPSPSTLPTDPSPSKAPSLLHPNGFLLHPPVALPPPTSAPIPQKIKGNESSVSPSPSTISLSPPYKAVPEPSTVERNFPPSVQPIPPQKTIPIVRPPISTPTAPAPVAIPPGNVPKTSPISQPIDHGSLPPNVDRRNESKSHNLEPISPGSFLHTPVALPPPTSAPIPQKIKGTESSISPSPSPSTKSLSLPYKAVPEPSMSERNFPPSMQPIPPQKKIPIVRPPISTPTAPAPVTIPPGDLPKTSPISQPIEHGSLPPKDGRRNESTNHNPKPVSPAPVATPSTNEPKISPISHSTNNGSFPPNAHSNGTNTNKPHLPEPISPAPALNLPKYSPVSQPTEPGSLPPTVHRRNSSIRHTLEPVSQAPVAEPPTKFPKNSPVSQPTRLGSFPPNVHNKTVHKGHTPEPVMPPPTSTFPADPPLAHPVIPAASPHELPAPVISPSLTPSRRFNGKNGGEPVSAPLYKTPKSPPAIVHSPAQAPSVDKTRPLHHAPEPLISPPISPFNKDHSPASSPSTAFYKHHHTRKTIISPAPASSYFVSPPTSKHQGSADSPFTFPIQSPATQVSPAPSPSFVTFPHSTKIPFHPPKESPLRPFLRNPKKPIQALPPPPPNEDCLSFICSEPLTNSPPGVPCMCVWPMRVGLRLNVPLYTFFPLVSELASEIATGVFMKPSQVRIMGANTATDLPDKTDALIDLVPLGEEFDNTTAFIASERFWHKQVVIKNSYFGDYEVLYVSYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIIALSAFLAIVLCSAAVFALSKFRDRVPESQPTSTPRAFPPSLVKAPGTAGPSVASASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGNLEDGSKVAFKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELSFRCLVYELIPNGSVESHLHGVDREKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEALIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTNSSQKELSSDFITASEQQPDSFRGHFAAANYDYGVDIENGLAASELFSSSARFGRQVSGSFRRHSYSGPLRTGRSKRLWQIIRNLSGGSVSEHGVMFK 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02355 1334 Pfam Protein tyrosine and serine/threonine kinase 950 1220 IPR001245 GO:0004672|GO:0006468
Trre3g02355 1334 MobiDBLite consensus disorder prediction 113 132 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 602 642 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 887 907 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 403 431 - -
Trre3g02355 1334 ProSitePatterns Protein kinases ATP-binding region signature. 953 975 IPR017441 GO:0005524
Trre3g02355 1334 Gene3D Phosphorylase Kinase; domain 1 919 1022 - -
Trre3g02355 1334 PANTHER OS01G0750732 PROTEIN 677 1246 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 239 260 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 654 679 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 352 388 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 38 157 - -
Trre3g02355 1334 FunFam receptor-like serine/threonine-protein kinase ALE2 920 1022 - -
Trre3g02355 1334 FunFam Receptor-like serine/threonine-protein kinase ALE2 1023 1242 - -
Trre3g02355 1334 ProSiteProfiles Protein kinase domain profile. 947 1223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02355 1334 MobiDBLite consensus disorder prediction 278 315 - -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 180 462 - -
Trre3g02355 1334 SUPERFAMILY Protein kinase-like (PK-like) 928 1220 IPR011009 -
Trre3g02355 1334 MobiDBLite consensus disorder prediction 50 75 - -
Trre3g02355 1334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1069 1081 IPR008271 GO:0004672|GO:0006468
Trre3g02355 1334 CDD STKc_IRAK 953 1221 - -
Trre3g02355 1334 Gene3D Transferase(Phosphotransferase) domain 1 1023 1247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02355 Trre-Chr3 22214560 22225268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02355 288 1334 Receptor kinase-like Gene Family AT5G56890 49.320 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Trre3g02355 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02355 - - psat:127136544 2067.74