Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02286 ATGTTACTCACTATTCTTGTTACTTTGCAATTTAAAGGTGGTAATAGCAATGTGTTCCATAAAGATAAAGTAACTGTCTACATTGTCAACAACATAACCAATCTTCAACTTGGTGTTCATTGTAAAGACAAAAACACTGATATTGGTTTTCAAAGACTAAATTTTAATCAGAGTTATGCTTTCACTTTTAGGCCTAAAGCTATTTTTGAATCAACTTTATACTTTTGTAGGTTTACATGGCCTAATGAATTTCACTACTTTGACATTTACATAGAAACAAGAGATGAAGAGATGTGTAACTCAGAATGTCATTGGGAAATAAATAAATCAGGACCATGTAGGGTTAATGGTTATATTATAGATTGTTTTCCTTGGAATAAAAATGTTGTTCCAAAAGGGAGACAACTTGGTGAAGAGAGTGTTAGTCTTAATGTGTAA 438 0.3105 MLLTILVTLQFKGGNSNVFHKDKVTVYIVNNITNLQLGVHCKDKNTDIGFQRLNFNQSYAFTFRPKAIFESTLYFCRFTWPNEFHYFDIYIETRDEEMCNSECHWEINKSGPCRVNGYIIDCFPWNKNVVPKGRQLGEESVSLNV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02286 145 PANTHER - 21 116 IPR010264 -
Trre3g02286 145 Pfam Plant self-incompatibility protein S1 25 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02286 Trre-Chr3 20969104 20969541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02286 19 130 Carbohydrate Esterase AT3G16970 40.336 1.65e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02286 - - psat:127136934 213.386