Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02262 ATGTTGATGGAGTTTGGGTGTGTATTTATGATTCTATTTGGCATTGTAATGTATGGTGAGGCAGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACTGGTGGTGTTGAAGGGTTTGAAGCCACTGCTGTCGAGTCTGATGAGAAGATCGATACCACTAGTGAGTTGGTGACTTCTTATGCCCGACACCTTGAGAATAGACACGATATGCTTCTGGGGCTGCTGTTCGACCGCAGGACATATACAAAACTCTATAGCTATAAACATCTTATAAATGGGTTTGCAGTTCATATTTCCCCGGAACAGGTAGAAACTCTTAGACATGCTCCTGGTGTGAAATCTGTTGAGAGAGACTGGAAAGTGAAGAGACTTACAACACATACTCCACAATTTTTGGGACTTCCAACCAGTGTTTGGCCAACTGGAGGAGGCTGTGATAGGGCTGGAGAGGACATTGTGATCGGATTTGTGGACTCTGGAATATATCCTCGCCACCCGAGTTTTTCTACTCATAATACTGAACCATATGGACCGCTTGCAAAATATAGAGGAAAATGTGAAGTTGATCCCAAGACTAAAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTTCTGGAACATTTAATCCTTCAATTGATTTTGCATCTCCTCTGGATGGAGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATACCTGTAAGGTTGCACGGACATGAATTCGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCGCTCTATAGACTGTTTGGAGGGTTTGTTGCCGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGAGTAGATATACTCAGCCTTTCAGTTGGACCAAATGGTCCACCAGCAGCTACCAAGACCACGTTTTTGAATCCTTTTGATGCTACACTTCTTGGGGCTGTGAAAGCTGGTGTGTTTGTTGCACAGGCTGCGGGAAACGGTGGCCCTTTTCCCAAGTCATTAGTTTCATATAGTCCGTGGATAGTATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATCTGCTCCTTGGAAATGGGAATATCTTAGCAGGACTTGGGCTGTCACCTTCTACACATTCAAACAATACGTACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCATCAGTTATGAAGTACAGCCCAACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGGAAAATTCTTCTCTGTGGCTATTCTTTCAACTTCGTTGTTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGACCCTTGGAGCAGTTGGATTTGTTCTCTGTGTAGAAAATGTTTCTCCTGGAACAAAATTTGATCCCGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTTAGCAAATCAAAGGAACTGATAGATTATTATAATATCTCCACACCAAGAGACTGGACTGGAAGAGTGAAGAGTTTCAATGGTAAAGGTAAAATTGAGGATGGTTTGATGCCTATTCTCCATAAATCTGCACCACAGGTGGCATTATTCTCTGCTAGAGGGCCAAATATAAAGGATTTCAGCTTCCAAGAAGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGGTGCTTGGTCCCTAAACGGAACTGATGAGCCAAATTATGATGGAGAGGGATTTGCTATGGTATCTGGAACTAGTATGGCTGCACCGCACATTGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACGTTGGAGCCCTGCTGCCATTAAATCAGCCTTGCTTACAACAGCAACAACTCTAGATAGGGCAGGAAACCCAATTCTAGCTCAACAATATTCTGAAACAGAAGCTATGAACCTGGTCAGAGCCACTCCTTTTGATTATGGAAATGGGCATGTGAATCCAAAAGCAGCCTTGGACCCTGGGCTCATCTTTGATGCAGGATACAAAGACTATGTAGGATTCTTGTGCACAACACCTGGCATTGATTTTCATGAGATAAAGAAGTACACAAACTCACCATGTAACAGAACCATGGGTCACCCATATAATTTAAACACTCCATCAATTACAGTTTCACATCTCGTGAGAACTCAAGTTGTAACTCGCACAGTCACAAACGTTGCTAAACAAGAAACCTACGTGATGACGGCTAGAATGCAACCAGCAGTTGCCATTGAAGTCAACCCTCCAGCAATGACAATCAAAGCTGGTGCATCACGTAAGTTTACTGTAACACTTACCGTTCGATCAGTGACCGGAAGATATAGTTTTGGAGAGGTTTTAATGAAAGGAAGCAGAGGACACAAAGTAAGGATTCCTGTTCTGGCCAATGGATACTCAAGATAG 2451 0.4288 MLMEFGCVFMILFGIVMYGEAEVYIVTVEGEPIISYTGGVEGFEATAVESDEKIDTTSELVTSYARHLENRHDMLLGLLFDRRTYTKLYSYKHLINGFAVHISPEQVETLRHAPGVKSVERDWKVKRLTTHTPQFLGLPTSVWPTGGGCDRAGEDIVIGFVDSGIYPRHPSFSTHNTEPYGPLAKYRGKCEVDPKTKRSFCNGKIIGAQHFAQAAIASGTFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRLHGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNGPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKSLVSYSPWIVSVAAAIDDRRYKNHLLLGNGNILAGLGLSPSTHSNNTYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGKILLCGYSFNFVVGTASIKKVSETAKTLGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSKSKELIDYYNISTPRDWTGRVKSFNGKGKIEDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYDGEGFAMVSGTSMAAPHIAGIAALIKQKHPRWSPAAIKSALLTTATTLDRAGNPILAQQYSETEAMNLVRATPFDYGNGHVNPKAALDPGLIFDAGYKDYVGFLCTTPGIDFHEIKKYTNSPCNRTMGHPYNLNTPSITVSHLVRTQVVTRTVTNVAKQETYVMTARMQPAVAIEVNPPAMTIKAGASRKFTVTLTVRSVTGRYSFGEVLMKGSRGHKVRIPVLANGYSR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02262 816 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 158 169 IPR023827 -
Trre3g02262 816 FunFam Subtilisin-like protease SBT1.5 155 375 - -
Trre3g02262 816 SUPERFAMILY Protease propeptides/inhibitors 85 125 - -
Trre3g02262 816 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 809 IPR045051 -
Trre3g02262 816 ProSitePatterns Serine proteases, subtilase family, serine active site. 596 606 IPR023828 -
Trre3g02262 816 ProSiteProfiles Serine proteases, subtilase domain profile. 122 673 - -
Trre3g02262 816 Gene3D - 690 813 - -
Trre3g02262 816 Pfam Fibronectin type-III domain 718 810 IPR041469 -
Trre3g02262 816 Pfam Peptidase inhibitor I9 23 126 IPR010259 -
Trre3g02262 816 Pfam Subtilase family 153 638 IPR000209 GO:0006508|GO:0008236
Trre3g02262 816 CDD PA_subtilisin_like 375 513 - -
Trre3g02262 816 CDD Peptidases_S8_3 129 632 IPR034197 -
Trre3g02262 816 Gene3D Peptidase S8/S53 domain 155 686 IPR036852 GO:0004252|GO:0006508
Trre3g02262 816 Gene3D - 368 533 - -
Trre3g02262 816 SUPERFAMILY Subtilisin-like 128 677 IPR036852 GO:0004252|GO:0006508
Trre3g02262 816 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 127 IPR037045 -
Trre3g02262 816 PRINTS Subtilisin serine protease family (S8) signature 232 245 IPR015500 -
Trre3g02262 816 PRINTS Subtilisin serine protease family (S8) signature 595 611 IPR015500 -
Trre3g02262 816 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02262 Trre-Chr3 20714374 20721581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02262 3 816 Subtilisin-like Serine Gene Family AT4G30020 78.676 0.0 1340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02262 - - gmx:100784999 1451.42