Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02227 ATGCAAAAATCTCTCTGTTTCTTTGCCATTTTGCTTTTAGTGCATTTAATTATACAAGTTGAAAGTGTTTGCACAAACGTTGTGGCTAGTTGTGCTGAAGTAGTTTGTCCTGAGCAATGTAAAATCTTTGGAAGAGGTGCAAAGGTTTTAGGATCAAATTGTGATTTCTACAATTTTTGCACTTGTACTTTTGAGCATCCAGCACCAGGACAACCATTACCTGCATGTGATATTGGAATGGGACTTTGCAATGATGAATGTGGGAATGGATGTTGTGACACAAAGTGTGCTAGCAAATATCCTAAGTCAGGTGTTGGATATTGTATAGATTTCCATGATGTCCATTATTGTAGTTGTACCTATAGGAGGCGTTGA 375 0.376 MQKSLCFFAILLLVHLIIQVESVCTNVVASCAEVVCPEQCKIFGRGAKVLGSNCDFYNFCTCTFEHPAPGQPLPACDIGMGLCNDECGNGCCDTKCASKYPKSGVGYCIDFHDVHYCSCTYRRR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02227 124 PANTHER DEFENSIN-LIKE PROTEIN 183 3 122 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02227 Trre-Chr3 20348109 20348602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02227 4 121 Plant Defensins Gene Families AT5G38330 30.645 8.00e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02227 - K18032 mtr:120578026 171.785