Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02210 ATGGCGAATCAGATCTCAAACTATCTTTTCTTCATCATTCTCGTTTTAGTTTTATATGGTCAAATGAAAGTGGAGGCAGGATCATGCTCAGAACCAATGGGAGCATGTGGTCCAATTGGAAATTGTGACCAAAGATGTAAAGCCAAGTATGGTAGTGGACAAGGGTCTTGCAAATTAGGTCTTTGCACATGTTATTACTCTTGTGGGCAAGGTCCAAGTCCAGATCCACCTGAAAGGAAATGTAAGAGTAGTCTTGGAATTTGCAATAGTCAATGTGACAATGCATGTTGCAATAGTAATTGTGCTTCAAGATTCAATCAAGGCATAGGAGATTGTAGTAATGTTGGTGGTTCACCTTATAGGGCTTGCACTTGTTATTATGTAGGAGATTGTCATTGA 399 0.3935 MANQISNYLFFIILVLVLYGQMKVEAGSCSEPMGACGPIGNCDQRCKAKYGSGQGSCKLGLCTCYYSCGQGPSPDPPERKCKSSLGICNSQCDNACCNSNCASRFNQGIGDCSNVGGSPYRACTCYYVGDCH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02210 132 PANTHER DEFENSIN-LIKE PROTEIN 183 1 127 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02210 Trre-Chr3 19994613 19995619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02210 9 127 Plant Defensins Gene Families AT4G30070 38.095 2.17e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02210 - - gsj:114386687 145.976