Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02185 ATGGGAGCTCCTAGGATCAATATTGTGGTGTTATCAATTTTGGTTTTTGTTATAGCTTGTGTACAAACAAGTTCAGCTCAACTTAGTAAAGGCTTCTATGGCAATACATGTCCAAATGTTGAACAATTGGTTAGGTCTGCCGTGGAGCTCAAGTTTCAGCAGACTTTTGTCACTGCTCCTGCCACTCTTCGACTCTTCTTCCATGATTGCTTTGTTAGGGGTTGTGATGCATCAATTTTGCTTGAATATCCAACAGCAGAGAAAAATCACCCTGATGACATTTCATTAGCTGGGGATGGCTTTGACACAGTGATTAAAGCAAAAGCAGCTATTGACAATGATTCTCAATGCAGAAATAAAGTATCTTGTGCAGATATACTTGCTCTTGCTACAAGGGATGTAGTCAATTTGGCTGGGGGACCATTTTATGAAGTTGAATTAGGAAGGCGTGATGGAAGGATATCTACAATTGCAAGTGTTCAACGGCATCTTCCTCATCCTGGATTCAATTTGGATCAACTTAATTCAATGTTTAGCTTCAATGGCCTCTCCCAAATAGACATGATTGCATTATCAGGTGCACATACAATTGGATTCTCTCATTGCAAGCACGTCTCCAAAAGAATCTACAAATTCAGCCCAACAAAAAGAATTGACCCAACACTAAATTTACAATATGCATTTGAACTTAGACAAGCATGTCCTATAAAAGTTGATCCTAGGATTGCTATAAACATGGATCCTATCACACCTCAAATATTTGACAATCAATATTTCAAGAATTTACAACAAGGAAAGGGACTCTTTACTTCAGATCAAGTGTTGGCTATAGATAAAAAGTCAAAGGAAACAGTTGACTTATTTGCATCAAATGAAGTAGCTTTTGAAAGTGCTTTTATTAATGCTATTACTAAGTTGGGAAGGGTTGGTGTTAAAACAGGAAATCAAGGTGAAATAAGGTTTGATTGTACAAGGGTGAACTAG 984 0.375 MGAPRINIVVLSILVFVIACVQTSSAQLSKGFYGNTCPNVEQLVRSAVELKFQQTFVTAPATLRLFFHDCFVRGCDASILLEYPTAEKNHPDDISLAGDGFDTVIKAKAAIDNDSQCRNKVSCADILALATRDVVNLAGGPFYEVELGRRDGRISTIASVQRHLPHPGFNLDQLNSMFSFNGLSQIDMIALSGAHTIGFSHCKHVSKRIYKFSPTKRIDPTLNLQYAFELRQACPIKVDPRIAINMDPITPQIFDNQYFKNLQQGKGLFTSDQVLAIDKKSKETVDLFASNEVAFESAFINAITKLGRVGVKTGNQGEIRFDCTRVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02185 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 Gene3D - 31 327 - -
Trre3g02185 327 Gene3D Peroxidase, domain 2 165 306 - -
Trre3g02185 327 PANTHER - 10 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Trre3g02185 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Trre3g02185 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Trre3g02185 327 FunFam Peroxidase 165 306 - -
Trre3g02185 327 FunFam Peroxidase 31 175 - -
Trre3g02185 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Trre3g02185 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02185 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02185 Trre-Chr3 19591706 19594726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02185 9 327 Peroxidase AT2G18980 71.473 1.25e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02185 K00430 - gmx:100808542 533.102