Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02151 ATGGCAACAAGCACAATCATTGCTGTTATTCTCGCTGTTGTGATTCTTATAATTTTAAGTGTTGTTACATGGTTACTACCAAATTGCCGAAGAAAAAGCTCGCAATTTATCACAGGGACTATAAAGGAATTTTTAGAGGATATGGAAAAGGAGAAGTTAGTTAGATTCACTGATCAACAACTACGGATTGCTACCGATAACTACTCTTTTCAGTTAGGATCCGGCGGTTTTGGAGTTGTTTATAAAGGAAGTTTTAGTAGTGGAACCATGATTGCGGTCAAGGTTCTGCACGGAAGTTCTGACAAGAGAAATGATCAGCAATTTATGGCTGAAGTGGGCACGATCGGTAAGAGAAGAAACCATGATATAAATCTTTCCGAAAGTCAAGAATGGTTTCCATTGTGGGTTTGGAAAAAATTTGATGCTGAAGAAGTGAAAGACTTGCTAGTAGCTTGTGGGATAGACGAGAAAAATACGGAGAGTGTTGAGAGAATGGTTAAGGTAGCATTGTCATGTGTTCAATATAGGCCGGAATCGAGACCTAAAATGAGTATTGTGGTACAAATGTTGGAAAGTTTAGCTGAAATTCCAAAACCATTGAATCCGTTTCAACACATGATTGATAGCACTTTCCTAACTTTTTCGATTCAAACATCAAATATCAACACTGATACAAGTAATGGTTCTGTCACTGATTCTTCTATAATGGTAATCGAAGATAGCGTTGAAGGTGTTACTCCTATCGTGACATCTATATAA 759 0.3742 MATSTIIAVILAVVILIILSVVTWLLPNCRRKSSQFITGTIKEFLEDMEKEKLVRFTDQQLRIATDNYSFQLGSGGFGVVYKGSFSSGTMIAVKVLHGSSDKRNDQQFMAEVGTIGKRRNHDINLSESQEWFPLWVWKKFDAEEVKDLLVACGIDEKNTESVERMVKVALSCVQYRPESRPKMSIVVQMLESLAEIPKPLNPFQHMIDSTFLTFSIQTSNINTDTSNGSVTDSSIMVIEDSVEGVTPIVTSI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02151 252 PANTHER OS07G0415500 PROTEIN 6 117 - -
Trre3g02151 252 Gene3D Phosphorylase Kinase; domain 1 40 126 - -
Trre3g02151 252 SUPERFAMILY Protein kinase-like (PK-like) 42 121 IPR011009 -
Trre3g02151 252 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02151 Trre-Chr3 19215152 19216442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02151 2 123 Receptor kinase-like Gene Family AT4G21410 31.579 1.01e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Trre3g02151 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02151 - - gmx:100819737 174.096