Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02150 ATGAGCAATATTAATCAGAACACAACCACCAAAAAGAGTAAGAGAAATTCACATTTCTCTGCAAAGATGGAAGCTCCAAGTTCTCAGCATACTCAAATTATTGAAATTAGCGGAGAACTTCCTGATACAGGAAGGAAAATTTGCGGAGAAGCAACATGTGAGTTCTCAGATGCGGGATCCATATCGAAAGATTCTGAAGAACGATCTACTGCTATGCGGAAGCTTTTGATTGCCGTGTCCCTTTGCATTGTTTTCATGGCCGTTGAGGTAGTTGGTGGTATTAAGGCTAACAGTCTTGCAATACTGACTGATGCTGCACATCTGCTTTCAGATGTCGCAGCATTCGCGATCTCGTTATTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGTCAGTCATTTGGATTTTTTCGAATTGAAATTCTTGGAGCTCTCGTTTCAATGCAATTAATATGGCTGCTTGCTGGAATTCTGGTATATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAAATGTGGACGGTTTTTTAATGTTTGTAGTTGCGGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTGGTATTGGGTCATGATCACGGCCACGGACATGGACATGGACATGATCATGGTCACGGACATGATGATCATGGTCACGGACATGGTCTTTCAGTTTCTACCAGTCGTGAAGTAAAGCATACAAAAGATGAGCATCATAACACGCATAGCGATCACACTCACCATCACGATGATGAAAAACATTCAAAAGATGAACACCACCATACTCATGAAGATCATGCACATCATCATGACCATGACCAGAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAAGCAAAATCCGAGAAGAAACGAAACATAAATGTACATGGGACTTATCTCCACGTACTTGGAGACTCTATCCAGAGTATCGGAGTAATGATTGGTGGAGCAATCATATGGTATAAACCTGAATGGAAAATTGTTGATTTGATTTGCACTCTAATATTTTCTGTAATTGTTTTGGCGACAACTATCAACATGCTGAGAAACATTTTGGAAGTCCTTATGGAAAGCACACCACGTGAGATAGACGCTACTCAGCTTCAAAAAGGGCTATTGGAGATGGAAGATGTAGTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTTGGGAAGGTATTGCTAGCTTGTCATGTTAAAATCAATCCTGAAGCAGATGCTGACATAATGTTGGACAAAGTTATAGACTACATCAAGAGGGTTCATAACATTAGTCATGTAACAATACAAATAGAACGCTAG 1314 0.4094 MSNINQNTTTKKSKRNSHFSAKMEAPSSQHTQIIEISGELPDTGRKICGEATCEFSDAGSISKDSEERSTAMRKLLIAVSLCIVFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQNVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHGHDHGHGHDDHGHGHGLSVSTSREVKHTKDEHHNTHSDHTHHHDDEKHSKDEHHHTHEDHAHHHDHDQKEVTEPLLGESKAKSEKKRNINVHGTYLHVLGDSIQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEDVVAVHELHIWAITVGKVLLACHVKINPEADADIMLDKVIDYIKRVHNISHVTIQIER 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02150 437 MobiDBLite consensus disorder prediction 1 26 - -
Trre3g02150 437 NCBIfam cation diffusion facilitator family transporter 72 437 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre3g02150 437 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 366 436 IPR036837 -
Trre3g02150 437 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 28 437 - -
Trre3g02150 437 Pfam Cation efflux family 75 359 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre3g02150 437 Gene3D Cation efflux protein transmembrane domain 71 358 IPR027469 -
Trre3g02150 437 MobiDBLite consensus disorder prediction 202 279 - -
Trre3g02150 437 SUPERFAMILY Cation efflux protein transmembrane domain-like 69 360 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02150 Trre-Chr3 19208081 19211889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02150 23 437 Inorganic Solute Cotransporters AT2G46800 65.566 4.31e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02150 K14689 - gmx:100794876 572.392