Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02148 ATGGAAGCTCCAAGCTCTCAGCATACTCAAATTATTGAAATAAGTGGAGAACTTCCTGATACAAGAAGGAAAATTTGCAAGGAAGCAACATGTGAGTTCTCAGATGCTGGATCCATCTCGAAAGATTCTGAAGAACGATCAACTGCGATGCGAAAGCTTTTGATTGCAGTGTCACTTTGCGTAATTTTCATGGCCGTTGAGGTAGTTGGTGGTATTAAGGCCAACAGTCTTGCAATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCGTTATTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGTCAGTCGTTTGGATTTTTTAGAATTGAGATTCTTGGTGCTTTGGTTTCGATGCAATTAATATGGCTGCTTGCTGGAATTCTGGTTTACGAAGCCATTTCTAGACTCATTGCTGGTCCTCAAAATGTGGATGGTTTTTTAATGTTTGTAGTTGCGGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTTGTATTGGGTCATGATCACGGACACGTACATGGACATGATCATCATGGTCACAGCCATGGTACTTCGGTTTCTACCAATCGTTATGTTAAGCATACAAACGACGAGCATCATCATACGGATGCTGATCACACTCACCATCATGATGATGAAAAGCATTCGAAAGATGAACACCACCATACTCATGAAGATCATGTGCATAATCATGACCATGACGTCAACAGAGAGGTTACTGAACCGCTTCTCGGTGAATCAAAAGCCATACCAGAGATGACAAAGAAACGAAACATAAATGTACACGGGGCTTATCTCCACGTACTTGGAGACTCTATCCAGAGTGTTGGAGTGATGATTGGCGGAGCAATCATATGGTATAAACCCGAATGGAAAATTGTTGATTTAATTTGCACTCTAATCTTTTCCGTAATTGTTTTGTTCACAACTATCAACATACTGAGAAACATTTTGGAAGTCTTGATGGAAAGCACACCGCGTGAGATAGATTCTACTCGTCTTCAAAAGGGACTATTGGAGATGGAAGAAGTAGTAGCTGTTCATGAGCTGCACATATGGGCCATTACAGTTGGGAAGGTATTGCTGGCTTGTCATGTTAAAATCAATCCCGAAGCAGATGCTGACATGATGCTCGACAAGGTTATAGACTACATCAAGAGTGTTCATAGCATTAGTCATGTAACTATACAGATAGAACGCTAG 1233 0.4128 MEAPSSQHTQIIEISGELPDTRRKICKEATCEFSDAGSISKDSEERSTAMRKLLIAVSLCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAISRLIAGPQNVDGFLMFVVAAFGLVVNIIMAFVLGHDHGHVHGHDHHGHSHGTSVSTNRYVKHTNDEHHHTDADHTHHHDDEKHSKDEHHHTHEDHVHNHDHDVNREVTEPLLGESKAIPEMTKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLFTTINILRNILEVLMESTPREIDSTRLQKGLLEMEEVVAVHELHIWAITVGKVLLACHVKINPEADADMMLDKVIDYIKSVHSISHVTIQIER 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02148 410 Gene3D Cation efflux protein transmembrane domain 49 331 IPR027469 -
Trre3g02148 410 MobiDBLite consensus disorder prediction 209 243 - -
Trre3g02148 410 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 333 IPR027469 -
Trre3g02148 410 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 6 410 - -
Trre3g02148 410 Pfam Cation efflux family 53 332 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre3g02148 410 NCBIfam cation diffusion facilitator family transporter 50 410 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Trre3g02148 410 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 339 409 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02148 Trre-Chr3 19176488 19177720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02148 1 410 Inorganic Solute Cotransporters AT2G46800 64.748 1.94e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02148 K14689 - gmx:100794876 543.888