Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02117 ATGCCGTACAATGAATACTACAACAACAATAACAACAACATAAGGGAGGTACAAAACCAAGCAGAAAGTGTTTCAATTTCCGGTTTAGATCAAGCAATACATAAAGAAGAACAAGCACAAGAACAGCAACAAAGGAGGAAAGTGTTTCATTGGACAAAAGAAGAACACATGCTTTTCTTGGAAGGTCTTCAAATTTGCAAGAAAGGAAAGTGGAAAGAAATCTCTCAAAAATATGTAAAGACAAAGACTTCAACTCAAGTAGCAAGCCATGCTCAAAAGTATTTTAAAAGGCAACAACAAAAACTTGATGTTAAGAGCAAAGATATTAAAAGGAAACCTAGAAAAAGCATCCATGATAAGACGATTATTATGGATATTATGCCAGATACTCCAACTAATCAAAATCAAGTGATTCAACAAGTCAACAATAATGAAGCATCACCATCATTCCCGATTCTCAACTCATTCGATGAAATAACGGGCATGTATGACAATTTTACCGAGGAAGATTTTGCCATGATTAATGACATCTTGAATGAAGATGGAGAAGTGACCGGAGTTAATCAAAATCAAGTGATTCAAGTCGACAACAATGAAGCATCACTATCATCCTCGATTCTCAACTCATTCGATGAAATATCGAACATATATATATGA 657 0.3455 MPYNEYYNNNNNNIREVQNQAESVSISGLDQAIHKEEQAQEQQQRRKVFHWTKEEHMLFLEGLQICKKGKWKEISQKYVKTKTSTQVASHAQKYFKRQQQKLDVKSKDIKRKPRKSIHDKTIIMDIMPDTPTNQNQVIQQVNNNEASPSFPILNSFDEITGMYDNFTEEDFAMINDILNEDGEVTGVNQNQVIQVDNNEASLSSSILNSFDEISNIYI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02117 218 PANTHER TRANSCRIPTION FACTOR KUA1 30 181 - -
Trre3g02117 218 ProSiteProfiles SANT domain profile. 51 99 IPR017884 -
Trre3g02117 218 ProSiteProfiles Myb-like domain profile. 43 95 IPR001005 -
Trre3g02117 218 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 99 IPR017930 -
Trre3g02117 218 Pfam Myb-like DNA-binding domain 51 95 IPR001005 -
Trre3g02117 218 Gene3D - 49 100 - -
Trre3g02117 218 SMART sant 47 97 IPR001005 -
Trre3g02117 218 SUPERFAMILY Homeodomain-like 44 99 IPR009057 -
Trre3g02117 218 CDD SANT 51 95 IPR001005 -
Trre3g02117 218 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 98 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02117 Trre-Chr3 18853265 18854033 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre3g02117 Myb_DNA-binding 9.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02117 - - mtr:11423031 108.997