Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02112 ATGGAGCCACAAGTGGAAGTAGCTCAGATAGATGGAAATGAATACTTTCTGAAGGTGTTCTGTGAGCATAGGCCTGGTGGTTTTGTAAAATTGATGGAGGCTTTGAACACTCTAGGCATGGATGTAGTACATGCCACTGTAACTAGCCACAAGAGTCTTGTCTCAGATGTTTTCAAAGTGGAGAAAAGGGAGAGTGAAATAGTTGAGGCTGAGGATAAGACTAGGGTGGTGACATCCCGTTGGTTCAGGATGGTTATGTAA 261 0.4368 MEPQVEVAQIDGNEYFLKVFCEHRPGGFVKLMEALNTLGMDVVHATVTSHKSLVSDVFKVEKRESEIVEAEDKTRVVTSRWFRMVM 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02112 86 SUPERFAMILY ACT-like 13 65 IPR045865 -
Trre3g02112 86 CDD ACT_UUR-ACR-like 17 76 - -
Trre3g02112 86 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02112 Trre-Chr3 18769854 18770864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02112 1 71 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 61.972 2.77e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02112 - - psat:127097943 136.732