Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02104 ATGGATCCAGGAGCCTGTCATTTGTATGTTAAGATAGTGTTTTATTGTTTTGATTCCTATCTGTTTAGTTTTCCTGGTGTAACAGCTCCTTGGGGTTTCTTCTTCTCTACACTGTTTGTGTTGTTCAGAAACTGCACATCAACTACATGCCAAGGAGGAATTGTTTGTATAAGTGGAGATGGACTTTTGGTTGAGGACATGCTTGCTTGTGACATGTTTGTTACTTGTTGTGACACTTATTTAGTGGTGAAGTCAGGAAGAACAAGAATGACTGAAATCAACAACCTTTGGGGAGCAGATCATATTGCTTCTCTTATTGATACTGCATTCATTGGCCACATAGGTCCTGTGGAGCTTGCTGCTGTCGGAGTTATAATTGCTATTTTTAATCAATCTTATGAAGCATTGCAAAGTCACCTATATGAGTTCAAGAATGAAATATACACTTTATCAAAAATTGAGCATCTAAATCTTGTGAGGTTATATGAATATTTGGAGCATGGAAATCAGAAGCTTATTGTTGTTGAGTATGTAGCTAATGTGAATCTTAGAGAACATTTAGATGGGGTCTAA 573 0.3682 MDPGACHLYVKIVFYCFDSYLFSFPGVTAPWGFFFSTLFVLFRNCTSTTCQGGIVCISGDGLLVEDMLACDMFVTCCDTYLVVKSGRTRMTEINNLWGADHIASLIDTAFIGHIGPVELAAVGVIIAIFNQSYEALQSHLYEFKNEIYTLSKIEHLNLVRLYEYLEHGNQKLIVVEYVANVNLREHLDGV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02104 190 SUPERFAMILY Protein kinase-like (PK-like) 112 188 IPR011009 -
Trre3g02104 190 Pfam Protein tyrosine and serine/threonine kinase 127 187 IPR001245 GO:0004672|GO:0006468
Trre3g02104 190 ProSiteProfiles Protein kinase domain profile. 103 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02104 190 Gene3D Transferase(Phosphotransferase) domain 1 104 190 - -
Trre3g02104 190 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 97 134 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02104 Trre-Chr3 18685106 18690985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02104 123 189 Receptor kinase-like Gene Family AT5G49760 40.299 5.83e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Trre3g02104 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02104 - - gmx:100788236 99.3673