Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02082 ATGGTGAGAGACATGTACTCATCAATTTCATCATCATCATCAAGAGGAGGGTATGGTGGTGATGGTGGAGACATGAACATGAACATGAACATAGACATGGGTATGATGAATATGAAACCTGCATGGCTAGAGAGGTTGATGGGTGAAACATTCTTTGGTGATTGTGGGGTCCACAAAAATCAAAGGAAGAACGAGAAGAACATTTTTTGCTTACACTGTTGTCTTAGCATCTGCCCCCACTGTTTACCTTCTCATACCTCTCATCCTCTTCTCCAGGTGAGAAGATATGTTTACCACAATGTAATTCGATTGGATGATCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCCTATACTATTAACAGTGCCAAAGTGATATTTTTAAATCAAAGGCCACAATCAAGGTCATGCAAAGGTACAACCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGACCCATTCCATTTTTGTTCTCTCTCATGCAAGGTAGATTTCATGGTGTACCAAGGTCAAAGTTTGTCCAACATTTTACATCGATTTGATGAATCTGACTTTGCAATATCACAATTCGAGGGACTAAGAGTGGATGGATCTGAGGTAATTGATGAAGATAACAATCTCAACCACATTGGCCCAAGTTCTTCTAATTACTCCATTAATGCCCATGATCAAGATCATGTCATCACTAGCACCAAGAAGAAGAACAAATCCAATAGATTTCTCCCTGGCATTGTCCTTTCTCTTGGAAGTAGAAGAAAAGGTGCTCCTCAAAGGGCCCCTCTTTTATAA 795 0.4 MVRDMYSSISSSSSRGGYGGDGGDMNMNMNIDMGMMNMKPAWLERLMGETFFGDCGVHKNQRKNEKNIFCLHCCLSICPHCLPSHTSHPLLQVRRYVYHNVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRSCKGTTNACFTCDRILQDPFHFCSLSCKVDFMVYQGQSLSNILHRFDESDFAISQFEGLRVDGSEVIDEDNNLNHIGPSSSNYSINAHDQDHVITSTKKKNKSNRFLPGIVLSLGSRRKGAPQRAPLL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02082 264 MobiDBLite consensus disorder prediction 1 21 - -
Trre3g02082 264 Pfam PLATZ transcription factor 94 165 IPR006734 -
Trre3g02082 264 MobiDBLite consensus disorder prediction 1 17 - -
Trre3g02082 264 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 37 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02082 Trre-Chr3 18396392 18403607 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre3g02082 PLATZ 8.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02082 - - ccaj:109804478 383.259