Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02047 ATGTTAGTAAATGTTTTCTTGATTATAGGAATTGGAAATGAAGAGAAGAGAAAGGAAAGATCACAAGTGGCTTATGAGAGAAAGAAGCTGGTCAATAAATTAAAGGCGAAAGTGGAGAAGATTGTGGACAAGAAGCTTGGCTCCCAATTTGAAGTTGGTGTATGTATGCCATTTGATTTATGTGGAATATTTGTTATACTTCTAAGTGGATGCTTTGTTTTAAACTGTCTAAGCAGTGCATTATGCGAGCAAAGAGGACGCTTCAACGAAGATAGAGTTCATAACTTTTATCAGTCAGTTTGCGATGTTGAAGATGGGAAGTCAAATAGGGTACAATATGAAGGTCCTGGCCCTAAATTGGCCGAAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCCGGAGTGAGATGGTATGATGTTGCAAGTCTTACTGAAGCAAAAAGGCTATTAGGTGAAGCTATTGTGCTTGAATATTCCCTTTATGGATGCCTGAATATTTCCAGGGCTTCTGGAGAGCATGAATCATCCAAAAGGGTCAAGTCCGAACTTCTTGTCCAGGTCAATGGTGTATGCAATAGCGCAACAATTGAAGATGGAAGCTTAAAACTAGTAATGGTCTTGGATGTTACTAACTTCCCATGTGACATTGATGAGGCACTAAGGAAAAGGCTGCAAAAGAGAATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGTTGATTCAGATAAGTTTGAAAACCGTGTACTGCCTTGGCTTCTACAGTTTGGCAATATTAGTATGA 786 0.388 MLVNVFLIIGIGNEEKRKERSQVAYERKKLVNKLKAKVEKIVDKKLGSQFEVGVCMPFDLCGIFVILLSGCFVLNCLSSALCEQRGRFNEDRVHNFYQSVCDVEDGKSNRVQYEGPGPKLAEMLERDVLETSPGVRWYDVASLTEAKRLLGEAIVLEYSLYGCLNISRASGEHESSKRVKSELLVQVNGVCNSATIEDGSLKLVMVLDVTNFPCDIDEALRKRLQKRIYIPLPNFESRKELIQISLKTVYCLGFYSLAILV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02047 261 Gene3D - 234 249 - -
Trre3g02047 261 PANTHER AAA DOMAIN-CONTAINING 167 249 - -
Trre3g02047 261 Gene3D - 13 53 - -
Trre3g02047 261 Gene3D - 167 233 IPR027417 -
Trre3g02047 261 Pfam ATPase family associated with various cellular activities (AAA) 167 232 IPR003959 GO:0005524|GO:0016887
Trre3g02047 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 247 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02047 Trre-Chr3 18139323 18141853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02047 14 52 Cytoplasmic Ribosomal Protein Gene Family AT4G13170 64.103 3.95e-09 53.5