Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02041 ATGTCATTATTGCCTAAACTACGCTGTGTCACTGTAGATGTTACTGGCACCCTAATGGCTTACAAAGGGGAGCTTGGTGACTATTATTGCATGGCAGCCAAAGCTGCCGGCCGTCCATGCCCAGACTACAAACGAATGCATGAAGGCTTTAAGTATGCATATAAGGACATGGCAAAGAACTATCCGTGTTTTGGATTTGCAGCCAAAATGCCGAACATTGTGTGGTGGAAAACTTGTGTGAAGGATTCTTTTGTCAGGGCTGGATATGATTATGACGAGGAGACATTTGAAAAGATTTTCAGACGCATCTATGCATCCTTTGGTTCATCTGCGCCATATACTGTCTTTCCGGATTCCAAACCGTTTCTTAGATGGCTTCGTGGAAAGGGTCTCAAAGTTGGCATTGTGAGCAATGCTGAGTATCGATATCGAGATGTGATTCTTCCAGCTTTAGGTTTAAATCAGGGATCTGAGTGGGACTTTGGCGTGTTTTCTGGCCTTGAAGGCGTTGAGAAGCCAGACCCAAGAATTTATGAGATTGCACTTGAGAGGGCTGGAAACATTGCACCTGAAGAAACTTTACATATCGGCGATAGCATGCGCAAAGACTATGAACCAGCTAAGAGCATAGGAATGCATGCACTACTGTTAGATAGATTTAAGACACCAGAAGCTGTGGAGTGGAGGAAATCCGGTGCAGTTGTTCTTCCCGACTTAACGACAACACAAGAATGGCTATCTTCAGAGAAATCAACTTGCTAG 762 0.4436 MSLLPKLRCVTVDVTGTLMAYKGELGDYYCMAAKAAGRPCPDYKRMHEGFKYAYKDMAKNYPCFGFAAKMPNIVWWKTCVKDSFVRAGYDYDEETFEKIFRRIYASFGSSAPYTVFPDSKPFLRWLRGKGLKVGIVSNAEYRYRDVILPALGLNQGSEWDFGVFSGLEGVEKPDPRIYEIALERAGNIAPEETLHIGDSMRKDYEPAKSIGMHALLLDRFKTPEAVEWRKSGAVVLPDLTTTQEWLSSEKSTC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02041 253 NCBIfam HAD hydrolase, REG-2-like, family IA 8 216 IPR011949 -
Trre3g02041 253 PANTHER OS02G0173600 PROTEIN 1 251 - -
Trre3g02041 253 Pfam haloacid dehalogenase-like hydrolase 8 210 - -
Trre3g02041 253 CDD HAD_dREG-2_like 119 227 - -
Trre3g02041 253 Gene3D - 10 221 IPR023214 -
Trre3g02041 253 Gene3D - 23 108 IPR044924 -
Trre3g02041 253 NCBIfam HAD-IA family hydrolase 128 211 IPR006439 -
Trre3g02041 253 SUPERFAMILY HAD-like 7 240 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02041 Trre-Chr3 18092759 18094419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02041 - - cam:101507960 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02041 3 18092759 18094419 Trre3g02041 3 18092759 18094419 ECH