Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02039 ATGGATGAGCAAGAACAGCCAAAAAGCTATTGGAGATGGAGCAAACAAGATTTCTTGCCAGAAGAATCCTTTCAAAGCTGGAACAACTATGTTTATGCTCTTTCACAAACATGGTTAAGGTTTAAGGATCGTGTTCAGACGAGATCAGATGATGCAACTGAGACACAAGAGCTAAAGAAAAAAAGTGAGAATGAAATGAAAAAATGTCTCAACTGGTGGGACCTAATGTGGTTTGGCTTTGGTTCAGTGATTGGTGCAGGAATCTTTGTCCTAACCGGACAAGAAGCTCATAACCATGCAGGCGCAGCGATAGTCTTATCCTATGTAGCATCAGGAATTTCAGCAATGCTTTCTGTTTTCTGCTATACCGAATTCGCAGTTGAAGTTCCAGCTGCAGGTGGTTCATTTGCTTACCTAAGAATTGAATTAGGTGACTTTGTTGCTTTCATAGCAGCCGGTAACATACTTCTCGAATGCGTACTTGGAAGTACAGCAGTATCAAGAGCATGGACTTCTTACTTCACTAGCCTTTTGAATCGTCCGAAAGATTCGCTACGAATCAAAGCACATCATCTCAAAGATGGATACAATTTGCTAGACCCTATAGCAGTTGGTGTTCTAGTAATCTCCGGAATAATTGTAATGATCAGCACAAGAAAAACATCGCTTCTCAATTGGATAGCATCGGCTATCAACACCGCTGTAATCATATTCGTAATCATTGCAGGGTTTTGTCACGCGAATACATCGAACTTGACACCTTTTTTACCTCATGGAGCTAAAGGTGTATTTCAAGCATCTGCAATTCTTTATTTTGCATATGGTGGTTTCGACAATATTGCAACCATGGCTGAAGAAACTAAAAATCCCCCAAAAGACATACCAATAGCCTTGATTGGTTCAATGTCAATGATCACAGTGATTTATTGTTTGATGGCACTTTCACTAAGCATGATGCAGAAATACACTGATATAGATACCGGCGCCCCTTTTTCGGTTGCATTTTAG 1008 0.4028 MDEQEQPKSYWRWSKQDFLPEESFQSWNNYVYALSQTWLRFKDRVQTRSDDATETQELKKKSENEMKKCLNWWDLMWFGFGSVIGAGIFVLTGQEAHNHAGAAIVLSYVASGISAMLSVFCYTEFAVEVPAAGGSFAYLRIELGDFVAFIAAGNILLECVLGSTAVSRAWTSYFTSLLNRPKDSLRIKAHHLKDGYNLLDPIAVGVLVISGIIVMISTRKTSLLNWIASAINTAVIIFVIIAGFCHANTSNLTPFLPHGAKGVFQASAILYFAYGGFDNIATMAEETKNPPKDIPIALIGSMSMITVIYCLMALSLSMMQKYTDIDTGAPFSVAF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02039 335 PIRSF AA_transporter 44 335 - -
Trre3g02039 335 Pfam Amino acid permease 70 318 IPR002293 GO:0016020|GO:0022857|GO:0055085
Trre3g02039 335 Gene3D Amino acid/polyamine transporter I 64 335 - -
Trre3g02039 335 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 56 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02039 Trre-Chr3 18084834 18085841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02039 4 335 Organic Solute Cotransporters AT2G34960 74.699 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02039 - - gmx:100797541 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02039 3 18084834 18085841 Trre3g02039 3 18084834 18085841 ECH