Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02024 ATGATGAAGATAGACAATGACTTCAATTCGGTTGCAGAAAGGAAATGCTTCACTTGTGTCTATGACTTGCACCTATCCAGTGTTTGTTGTGAGTGCTCTCGTGATAGCTATTCTTGTCTTAGACGATTGAAGTTGTTTTGCTTATGTGAAATGAATAAAAGATTTGTTTGGGTTCGTCATTCTATGAATGATATAAGTACAATGGTTGAAGGATTAGAAGGAGAGCCACATGCAATAAAAGCGAGGGCAACTCGAAACAATGGAGTGGTTTCTTCTAAAGCTGAGGATGCATGCATAGAGGAACAAGATACAAAGAGAGCCATTTGCAAAACCAAGAATTGTGACGAAGGGAAAACCTCGCCTTCTCATCCAGGAACAAATGAGAGGTAG 390 0.3974 MMKIDNDFNSVAERKCFTCVYDLHLSSVCCECSRDSYSCLRRLKLFCLCEMNKRFVWVRHSMNDISTMVEGLEGEPHAIKARATRNNGVVSSKAEDACIEEQDTKRAICKTKNCDEGKTSPSHPGTNER 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02024 129 Pfam C5HC2 zinc finger 16 68 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02024 Trre-Chr3 17913902 17914291 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02024 1 117 JUMONJI Transcription Factor Family AT1G30810 35.043 2.52e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02024 K11446 - gmx:100814590 152.525