Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02019 ATGAAACAGAAACATCAATTACTAATACATAAATTTGAGTTAGAGGAAAGGAAATTTGAGGATCTACATTTAAAGTCTAATTCCTTTACACAAATGTCTGAGATGAGATTTCTCAAATTCTATTATGGAAAGTGCAACGGTACAAGTAATATATATCTTCCGGAAAATGGTCTGGATTCATTGTCTGGTAAATTGAGGTACCTTGAATGGCATAGATATTGCCTAAAGTCTTTGCCATCACAATTTAGTGCTAATTTTCTTGTTGAGCTTTCCATGCCTTACAGCAACCTTCAAAAGCTTTGGGATGGAGTTAAGGAAATTGACCTTAGATTCAGCAATGAGTTGATTGAGGTCCCAGACTTGTCTAAGGCTACGAATTTGGAATGGTTAGCACTTACTGGGTGTAGAAATTTGCACGAAATCCATCCTTCCATATGGTCTCTCAACAAGCTTAAAGATCTCGAATTAGAAGGTTGTACGAAGATTGAAAGTTTTCAAATAGACAATCATTTAGATTCTCTTCAAACCATCCAACTCAGCAACTGCTCATCTCTGAAAGAATTCTCCGTCACTTCAAATAAACTCGAGAAACTGTGGTTAGATGGTAAATCTATCCAAGAATTTCCCTCATCAATTTGGTGTTGCCAGAAATTGAAGATGATTGATCTACACAATTGTGATAATCTTGTTGGTTTTGGACAAAATGAAAACTTTATAGAAATTGGTTCTCTTAGTAGTCTGGTTCTTTCTGGCTGCAAAAAACTCAATGCATCAAATCTTTGTTTCAACTTCAAAGCATGGCAATCAACTTTAACCTCATTGAATTTGGAAAATAGTTGCAATTTAGAGGCATTCCCTGATAGCATTGGTTTATTATCATCATTGCAATGCCTAAAACTAAGTGGAAGCAATGTTGAGAGATTGTCACCAAATATAAAAAATCTTCACAACCTTAATGAGCCAAGGTTAGACAATTGCAAGAAACTCGTGTCGGTGTCTGTGTCCGAGCTTCCACAATCACTGAGGTTGTTTAGTGCTATTAAATGCATTTCATTAGTCTCGGACCTTACTACATTGGACATACCTTTTGAACATAGAACTAAACCTCAACCATATATATATATAATTAGTAGTAAACTCTCATACCATGCTGCTAAGACTCAAGGTCAGGCCATGCTGCTAAGAGTATCAGCCAAACCACGAAATACAGGATAA 1215 0.3597 MKQKHQLLIHKFELEERKFEDLHLKSNSFTQMSEMRFLKFYYGKCNGTSNIYLPENGLDSLSGKLRYLEWHRYCLKSLPSQFSANFLVELSMPYSNLQKLWDGVKEIDLRFSNELIEVPDLSKATNLEWLALTGCRNLHEIHPSIWSLNKLKDLELEGCTKIESFQIDNHLDSLQTIQLSNCSSLKEFSVTSNKLEKLWLDGKSIQEFPSSIWCCQKLKMIDLHNCDNLVGFGQNENFIEIGSLSSLVLSGCKKLNASNLCFNFKAWQSTLTSLNLENSCNLEAFPDSIGLLSSLQCLKLSGSNVERLSPNIKNLHNLNEPRLDNCKKLVSVSVSELPQSLRLFSAIKCISLVSDLTTLDIPFEHRTKPQPYIYIISSKLSYHAAKTQGQAMLLRVSAKPRNTG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02019 404 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 192 339 IPR044974 GO:0006952
Trre3g02019 404 Pfam Leucine Rich Repeat 86 105 IPR011713 -
Trre3g02019 404 Gene3D Ribonuclease Inhibitor 196 368 IPR032675 -
Trre3g02019 404 SUPERFAMILY L domain-like 26 352 - -
Trre3g02019 404 Gene3D Ribonuclease Inhibitor 8 195 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02019 Trre-Chr3 17760020 17762141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02019 27 320 WRKY Transcription Factor Family AT4G12020 34.091 5.12e-34 132