Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01983 ATGTTCAGAAGCAAGCCACGAACAATCATTGATGGTCATTCAGGGGCATTTCTTTACAATAAAAGGGGATTTAACTCTATGGCTAAGGAGATTAAAACTGTACAATTAACAATGTTTTATAATGGAGAAGTTATTGTGTTGGATGATTTTCTTGATGACAAAGTGGAGGAGCTAAACCACCTTCAATTATTCCTAATGTGA 201 0.3483 MFRSKPRTIIDGHSGAFLYNKRGFNSMAKEIKTVQLTMFYNGEVIVLDDFLDDKVEELNHLQLFLM 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01983 66 Pfam tify domain 34 58 IPR010399 -
Trre3g01983 66 ProSiteProfiles Tify domain profile. 29 64 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01983 Trre-Chr3 16848122 16849220 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trre3g01983 tify 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01983 - K13464 gmx:100778169 46.9802