Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01833 ATGTTGAAATTGTTTCTAGGGTTTATCACAAGAAAATCAAAAATCCCTAAATTGGACCCTCTTTCTCAACACTTTTCATTCCCAATTTCACACAGATCATTCAGATACTGCACAACCACATCAGAATCAGACACACACCCATTTCCAGTATCATACCTCATCAACAATTTCGGTTTCTCACATGAATCAGCTCTCAAAGCTTTCAACAACAAACAGGTTCGTTTCAAATCTCCAGAAAAACCTAATTCGGTTATCAACTTCTTCAAAGACAATGGTTTTTCACACTCCGATATACGAATCATCATCAGAAAAGCACCATGCTTACTTTCATCACAACCCAACAATGCAATTTTGCCAAAGTTTCAATTTTTTCTATCCAAAGGTGCTTCTTCCTCTGACATTGTTTCATTGTTAACTGCAAACCCTACAATTTTACAACGTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAGTAGGTTTTTGAAAACCAACAAGGATGTTATTGTTTGCTTAATTCGACGTTCGACTGCATTTCTTATGAATTCCTATCGCCGTATGCTGGTTAATATCAATTTGATGACTGATTTTGGAGTTAAACATTCTAACATTGCTAAGTTGCTTCAAATAAGGCCGTCTATATTTGGTTCAAATGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGAATACTTTTGGGACTGCTTTGATGGCCAAGAAATGTATAAGTGAAGAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTTTTTCAAGCATTTAGGTCATATCCTAGTTTGATGTTGGCTTCAATTGATAAGTTTACATAA 879 0.3527 MLKLFLGFITRKSKIPKLDPLSQHFSFPISHRSFRYCTTTSESDTHPFPVSYLINNFGFSHESALKAFNNKQVRFKSPEKPNSVINFFKDNGFSHSDIRIIIRKAPCLLSSQPNNAILPKFQFFLSKGASSSDIVSLLTANPTILQRSLEKRIIPLFELLSRFLKTNKDVIVCLIRRSTAFLMNSYRRMLVNINLMTDFGVKHSNIAKLLQIRPSIFGSNDLIKSLEEVKGLGFDPSMNTFGTALMAKKCISEELWNQKVDVFKKWGWSDEDVFQAFRSYPSLMLASIDKFT 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01833 292 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 Pfam mTERF 85 289 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 PANTHER CGI-12 PROTEIN-RELATED 47 290 IPR003690 GO:0003690|GO:0006355
Trre3g01833 292 Gene3D Transcription termination factor 3, mitochondrial 54 218 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01833 Trre-Chr3 14915718 14916682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01833 mTERF 3.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01833 K15032 - mtr:25488156 250.751