Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01820 ATGTTCAGGAAATGGTTTCTCTCCCACAATCTTGTTTTAAGTATCACCAAATCCCCAAAATTTCACCCTTTTATCAAACATTTTTCGTTCCCATTTTCACCCTCCACATTCTGCACCACTACATCAACTACTGCATCAGAATCTGAATCAGACACAAACCCATTACCTGTATCATACCTCATGAACAATTTTGGTTTCTCACATGAATTTGCTCTCAAAGTTTTCAACCAAAAACAGGTTCGTTTCAATACACTTGAAAAGCCTAATTCAGTTATCACCTTCTTCAAAAACCATGGTTTTTCACAATCCAACATACGCACCATCATTAGAAAATCACCATGGTTACTTTCAGCAGAACCCCATAAAAGGTTATTGCCAAAGTTTCAATTTTTTCTATCCAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTGACAGTAAACCCTAGAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGATTCTTCAAAACCAACAAGGATGTCATTGTTTGCTTAATTCGACATCCATGTTCGTTTAATTGTATTCCATATGACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTATGTGATTCTGTCATTGCTAGATTTCTTCAAACAAGGCCAATAATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAAGGTTTAGGGTTTAATCCGTCTATGACTACTTTTGAGGCTGCTTTGATGGCCAAGAAATGTATAAGTAAAAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAGGATTTAGGTCATGTCCTAGTTTGATGTTAGTTTCAATTGATAAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTCAATTTTACAATTTCTTTTGATGAAAGCTATATGAGGAAAAAATGGAACTTGCATACACAAAGGAAAACAATGGCATGCCACTCACTAAATAGGTTCTTGAAAACCAACAAGGATATCATTTTTTGGAGTTTGTGA 1056 0.3475 MFRKWFLSHNLVLSITKSPKFHPFIKHFSFPFSPSTFCTTTSTTASESESDTNPLPVSYLMNNFGFSHEFALKVFNQKQVRFNTLEKPNSVITFFKNHGFSQSNIRTIIRKSPWLLSAEPHKRLLPKFQFFLSKGVSSSDIVSLLTVNPRILQSSLEKRIIPLFELLSRFFKTNKDVIVCLIRHPCSFNCIPYDLIVANINLMTDFGVCDSVIARFLQTRPIIFGSTDLIKSLEEVKGLGFNPSMTTFEAALMAKKCISKKLWNQKVDVFKKWGWSDEAVFQGFRSCPSLMLVSIDKFGEKGHSKGLNFTISFDESYMRKKWNLHTQRKTMACHSLNRFLKTNKDIIFWSL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01820 351 Gene3D Transcription termination factor 3, mitochondrial 75 192 IPR038538 -
Trre3g01820 351 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Trre3g01820 351 SMART mt_12 214 242 IPR003690 GO:0003690|GO:0006355
Trre3g01820 351 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Trre3g01820 351 PANTHER CGI-12 PROTEIN-RELATED 57 299 IPR003690 GO:0003690|GO:0006355
Trre3g01820 351 Pfam mTERF 93 297 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01820 Trre-Chr3 14732581 14734418 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01820 mTERF 3.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01820 K15032 - mtr:25488156 255.758