Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01815 ATGTCAAAGCTGCTGCAACTTTATCTGCTACTCCAACCATTTCCTTTACAACTTACTGCTCAAATTATAAAAAAGAGGAAACATTTGGTGTTCATCCACACTTCCAACAAAAGAAGAAAAGTGCATCAGACAATTTCTCACTTTTGTAAGGAATTAATGGAACCTATTGATGAAAATGAAGAGTTTGTTGCAAATGAGATTACCAATAATGAATCATATGCGAGTGGTATAGAGGTTAATAAAGATGAAGAACCTTACCTTGGAATGGAATTTGAGTCACAGGAAGATGCTTATTCTTTCTATGCTTGTTATGCTAAAAGAGTCGGTTTCGGTGTATGCACCAAAAGTAGTCGTCGTTCAAAACTTTCTAAACAATTCATCGATGTAAAATATGCTTGCACGAGACATGGGAAAAAGCGAGAATCGACTGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTGACTTACATATTAAAAGAAACTATGAAGGAAAATGGGTAATCCACGGCTTCATCAAAGATCATAATCATGATCTTTTGCCAACATATGCACATTATTTTCCTAGGCATAGAAAAATAAATGAATCTCAGAAGCAATGTATTGAAACTTTGCAACACGTTGGTGTGAGAGCAAACAAAATATTTGCAACATTGGCCAAACAACATGGAGGATATGAGAAAGTTGGTTGCTTGGAGAAAGATATCAGAAATCATTTAGATAAGGATCGTCGTTTGAATTTAGAATCGGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCTAGATTCTTATCGATCGAGTCGAATTGA 837 0.3584 MSKLLQLYLLLQPFPLQLTAQIIKKRKHLVFIHTSNKRRKVHQTISHFCKELMEPIDENEEFVANEITNNESYASGIEVNKDEEPYLGMEFESQEDAYSFYACYAKRVGFGVCTKSSRRSKLSKQFIDVKYACTRHGKKRESTAQNPRPCLKVECEADLHIKRNYEGKWVIHGFIKDHNHDLLPTYAHYFPRHRKINESQKQCIETLQHVGVRANKIFATLAKQHGGYEKVGCLEKDIRNHLDKDRRLNLESGDANAMLECFMLMQEENPRFLSIESN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01815 278 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 57 256 - -
Trre3g01815 278 Pfam FAR1 DNA-binding domain 99 184 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01815 Trre-Chr3 14710226 14711286 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre3g01815 FAR1 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01815 - - mtr:112418473 367.081