Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01812 ATGTTGAAATTGTTTCTCCACAACACAACAAAATCAACAACCCCAAAATTCCACCGTCTTCTTCCCTCATTTTCATTCAGATATTATTGCATCACAACAACAACTGCATCAGAATCTGAATCAGAGACAAACCCATTTGCTGTATCATACCTCATCAACAATTTTGGTTTCTCACATGAATATGCTCTCAAAGCTTTCAACCAAAAACAGGTTCGTTTCAATACACTTGAAAAGCCTAATTCAGTTATCACTTTCTTCAAAACCCATGATTTTTCACAGTCCAACATACGCACCATCATCAGAAAAGCACCATGGTTACTTTCATCAGAACCCCACAAAACGTTATTGCCAAAGTTTCAATTTTTTTTATCAAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAATTGCAAACCCTAAAATTTTACATAGTAGCTTGGAGAAACGATTAATCCCTCTTTTTGAATTATTAAGTAGATTCTTCAAAACCAACATGGATGTCATTGTTTGCTTAATTATAAATTTGCATTCATTTGCTCATAATCCATATGACCGTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTATGTGATTCGAGCATTGCTAGATTGCTTCAAACATGGCCATCGATATTTGGTTCAAATGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGACTACTTTTGAAGATGCTTTGATGGCCAAGAAATATATGACTAAAAAACATTGGAATAAGAAAGTTGATGTCTTTAAGAAACAAGGTTGGTCTGATGAAGTTAAGGGTTTAGGGTTTAATCCTTCAACGACTACTTTTCAGTATGCTTTGTCGCGAAAACTTAAGAAGGAGAAAGTTGATAACTTTAAAAAATGGGGTTTGTCTGATAAAGATATTGATAATGCATTTAGCGTTAAGCCTGATCTTGGTTGGGTTTCCTTGGATAAGATTAATTTGGTGATGAATTTTTGGATTAATCAATTGGGTTGGGATTCCTTGGCACTTATTAAATGTCCAATTATATTTTGTTTAAGTTTGGAGAAAAGGATCATTCCAAGAGCTTCGGTTTTGCAATTTCTTTTAATGAAAGGTCTGCGAGAAAAGGATTCAAGCTTGGTTACACCAATTTATAAACATGAGGAGAAATTTTTCTTGAAAAGGTTTGTTTTCAGATTTAAGGGGGAGTCTGATTATCTATTAAAGCTATATCAGGACAAAATGAAACTTGCATACACAAAGGAGAAGAACAATGGCACACCATTCACTAAATAG 1299 0.3387 MLKLFLHNTTKSTTPKFHRLLPSFSFRYYCITTTTASESESETNPFAVSYLINNFGFSHEYALKAFNQKQVRFNTLEKPNSVITFFKTHDFSQSNIRTIIRKAPWLLSSEPHKTLLPKFQFFLSKGVSSSDIVSLLIANPKILHSSLEKRLIPLFELLSRFFKTNMDVIVCLIINLHSFAHNPYDRIVANINLMTDFGVCDSSIARLLQTWPSIFGSNDLIKSLEEVKGLGFDPSMTTFEDALMAKKYMTKKHWNKKVDVFKKQGWSDEVKGLGFNPSTTTFQYALSRKLKKEKVDNFKKWGLSDKDIDNAFSVKPDLGWVSLDKINLVMNFWINQLGWDSLALIKCPIIFCLSLEKRIIPRASVLQFLLMKGLREKDSSLVTPIYKHEEKFFLKRFVFRFKGESDYLLKLYQDKMKLAYTKEKNNGTPFTK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01812 432 Gene3D Transcription termination factor 3, mitochondrial 169 403 IPR038538 -
Trre3g01812 432 Pfam mTERF 84 269 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 Pfam mTERF 287 392 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 SMART mt_12 341 375 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 SMART mt_12 205 233 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Trre3g01812 432 PANTHER CGI-12 PROTEIN-RELATED 269 399 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01812 Trre-Chr3 14660260 14661558 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01812 mTERF 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01812 K15032 - mtr:25488156 323.168