Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01811 ATGTTGAAATGGTTTCTCAACAAGAATGTTGTTTTAGATCTCATCACAACAAATTCAACAACCCCAAAATTCAATCTTCTTCTTCTTCCCTCATTTTCATTCAGATATTATTGCAGCACAACAACAACAACAACAACCACATCACAGTCACAATCTGAATCAGAGACACACCCATTACCTGTTTCATACCTCATCAACAATTTTGGATTCTCAACTCAATCAGCTCTCAAAGCTTTCAACCAAAAACAGGTTCGTTTCAATACACTTGAAAAGCCTAATTCAGTTATCACCTTCTTCAAAACCCATGATTTTTCACAGTCCAACATACGCACCATCATCAGAAAAGCACCATGGTTACTTTCATCAGAACCCCACAAAATGTTATTGCCAAAGTTTCAATTTTTTTTATCAAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAATTGCAAACCCTAAAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCGTTTTGAATTATTAAGTAAGTTCTTGAAAACCAACAAGGATGTCATTGGTTGCTTAATTATACATTGGAGTTCATTTGCTCGTACTCCATATGACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTACGTGATTCGAGCATTGCTAGATTGCTTCGAATAAGGACATCTATACTTGGTTCAAATGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGCTTTAATCCTTCTTTGATTACTTTTGGGATTGCTTTGATAGCCAAGGAATGTATGGGTAAAAAACTTTGGGATAAGAAATTTGACACCTTTAAGAAATGGGGTTGGTCTGATGAAACTGTTATTCAAGCATTTAGGTCATATCCTAATCTGTTGACTGCTTCCATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCACTTACTAGATCTCCACATATATTTTGTTATAGTTTACATAAAAAGGATCGTTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTCTAAGAGAAAAGAATGCAAGCTTAGTTGCACCATTTAG 1086 0.3471 MLKWFLNKNVVLDLITTNSTTPKFNLLLLPSFSFRYYCSTTTTTTTTSQSQSESETHPLPVSYLINNFGFSTQSALKAFNQKQVRFNTLEKPNSVITFFKTHDFSQSNIRTIIRKAPWLLSSEPHKMLLPKFQFFLSKGVSSSDIVSLLIANPKILQSSLEKRIIPRFELLSKFLKTNKDVIGCLIIHWSSFARTPYDLIVANINLMTDFGVRDSSIARLLRIRTSILGSNDLIKSLEEVKGLGFNPSLITFGIALIAKECMGKKLWDKKFDTFKKWGWSDETVIQAFRSYPNLLTASIDKINLVMSFWVNQLGWNSLALTRSPHIFCYSLHKKDRSKSLSFAISFDERSKRKECKLSCTI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01811 361 Gene3D Transcription termination factor 3, mitochondrial 181 354 IPR038538 -
Trre3g01811 361 PANTHER CGI-12 PROTEIN-RELATED 61 334 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 SMART mt_12 218 246 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 Pfam mTERF 97 229 IPR003690 GO:0003690|GO:0006355
Trre3g01811 361 Pfam mTERF 268 334 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01811 Trre-Chr3 14652638 14653723 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01811 mTERF 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01811 K15032 - mtr:25488156 286.96