Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01810 ATGTTGAAATGGTTTCTCAACAAGAATGTTGTTTTAGATCTCATCACAACAAATTCAACAACCCCAAAATTCAATCTTCTTCTTCTTCCCTCATTTTCATTCAGATATTATTGCAGCACAACAACAACAACAACAACCACATCACAGTCACAATCTGAATCAGAGACACACCCATTACCTGTTTCATACCTCATCAACAATTTTGGATTCTCAACTCAATCAGCTCTCAAAGCTTTCAACCAAAAACAGGTTCGTTTCAATACACTTGAAAAGCCTAATTCAGTTATCACCTTCTTCAAAACCCATGATTTTTCACAGTCCAACATACGCACCATCATCAGAAAAGCACCATGGTTACTTTCATCAGAACCCCACAAAATGTTATTGCCAAAGTTTCAATTTTTTTTATCAAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAATTGCAAACCCTAAAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCGTTTTGAATTATTAAGTAAGTTCTTGAAAACCAACAAGGATGTCATTGGTTGCTTAATTATACATTGGAGTTCATTTGCTCGTACTCCATATGACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTACGTGATTCGAGCATTGCTAGATTGCTTCGAATAAGGACATCTATACTTGGTTCAAATGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGCTTTAATCCTTCTTTGATTACTTTTGGGATTGCTTTGATAGCCAAGGAATGTATGGGTAAAAAACTTTGGGATAAGAAATTTGACACCTTTAAGAAATGGGGTTGGTCTGATGAAACTGTTATTCAAGCATTTAGGTCATATCCTAATCTGTTGACTGCTTCCATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAATTGGGTTGGAATTCCTTGGCACTTACTAGATCTCCACATATATTTTGTTATAGTTTACATAAAAAGGATCGTTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGCTTTAAGGGGGAGTCTGATTATCTATTAAAGCTATATCAGGACAAAATTAAACTTGCATACACAAAGGAACACAATGGCATGCCACTCACTAAATAG 1143 0.3473 MLKWFLNKNVVLDLITTNSTTPKFNLLLLPSFSFRYYCSTTTTTTTTSQSQSESETHPLPVSYLINNFGFSTQSALKAFNQKQVRFNTLEKPNSVITFFKTHDFSQSNIRTIIRKAPWLLSSEPHKMLLPKFQFFLSKGVSSSDIVSLLIANPKILQSSLEKRIIPRFELLSKFLKTNKDVIGCLIIHWSSFARTPYDLIVANINLMTDFGVRDSSIARLLRIRTSILGSNDLIKSLEEVKGLGFNPSLITFGIALIAKECMGKKLWDKKFDTFKKWGWSDETVIQAFRSYPNLLTASIDKINLVMSFWVNQLGWNSLALTRSPHIFCYSLHKKDRSKSLSFAISFDESFKGESDYLLKLYQDKIKLAYTKEHNGMPLTK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01810 380 PANTHER CGI-12 PROTEIN-RELATED 61 334 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 Gene3D Transcription termination factor 3, mitochondrial 178 346 IPR038538 -
Trre3g01810 380 Pfam mTERF 268 334 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 Pfam mTERF 97 229 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 SMART mt_12 218 246 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Trre3g01810 380 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01810 Trre-Chr3 14652502 14653723 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01810 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01810 K15032 - mtr:25488156 301.597