Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01809 ATGAATACCTATCGCCGTATGCTGGTTAATATCAATTTGATGACTGATTTTGGAATTTGTAATTCTAACATTGCTACATTGCTTCAAATAAGACCGTCTATATTTGGTTCAATTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGCTTAGGGTTTAATCCTTCAATGACTACTTTTGTGAATGCTTTGATGGCCAAGAAATGTATAAGTAAAAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAGCATTTAGGTCATATCCCGGTTTAATGTTGGTTTCAATTGATAAGGTTAATTTAGGGATGACTTTTTGGGTCAATCAATTGGGTTGGAATTCCCTGGAACTTACTAAATGTCCACTTATATTTAGTTATAGTTTACATAAAAGGATCATTCCAAGAGCTTCAGTTTTGCAATATCTTTTGATGAAAGGTCTACGAGAAAAGAATGCAAGCTTAGTTGCACCATTTACTTATCCTGAGAAGTTGTTCTTGGACAAGTTTGTTTTCAGCTTTAAGGGTGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGGAACTTGCATACACAAAGGAAAACAATGGCATGCCACTCACTAAATAG 642 0.3411 MNTYRRMLVNINLMTDFGICNSNIATLLQIRPSIFGSIDLIKSLEEVKGLGFNPSMTTFVNALMAKKCISKKLWNQKVDVFKKWGWSDEAVFQAFRSYPGLMLVSIDKVNLGMTFWVNQLGWNSLELTKCPLIFSYSLHKRIIPRASVLQYLLMKGLREKNASLVAPFTYPEKLFLDKFVFSFKGESDYLLKLYEEKMELAYTKENNGMPLTK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01809 213 FunFam Mitochondrial transcription termination factor-like 1 187 - -
Trre3g01809 213 Pfam mTERF 7 169 IPR003690 GO:0003690|GO:0006355
Trre3g01809 213 Gene3D Transcription termination factor 3, mitochondrial 2 186 IPR038538 -
Trre3g01809 213 PANTHER CGI-12 PROTEIN-RELATED 5 182 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01809 Trre-Chr3 14634987 14645482 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01809 mTERF 9.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01809 K15032 - mtr:25488156 223.402