Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01807 ATGTTGAAGAAATGGTTTCTCTCCCACAGTGTTGGTTTCATCAACCCAAAATTCAAAACTCTTGTTCAACACTTTTCATTCAGATATTATTGCAGCACAACAACAACCACATCATCACAATCACAATCAGAATCTGAACCAGACACAAACCCATTACCTGTATCATACCTCATCAACAATTTTGGTTTCTCACATGAATCTGCTCTCAAAGTTTTCAACCAAAAACAGGTTCGTTTCAATACACTTGAAAAGCCTAATTCAGTTATCACCTTCTTCAAAACTCATGGTTTTTCACAATCCAACATACGCACCACCATCAAAAAAGCCCCATGGTTACTTTCATCAAAACCCAACAATAAAATTTTGCCAAAGTTTCAATTTTTTTTATCCAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAACTGCAAACCCTAAAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCGTTTTGAATTATTAACTAGATTGTTTCAACAAAGTCCTTCTATATTTGGTTCAACTGATTTGCTTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGACTACTTTTGTAGCTGCTTTGATGGCCAAGAAATGTATGACTAAAAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAACAAGGTTGGTCTGATGAAGTTGTTTTACAAGCATTTAGGTCATATCCTAGTTTGATGTTGGTTTCAATTGATAAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTCAATTTTACAATTTCTTTTGATGAAAGCTATATGAGGAAAAAATGGAACTTGCATACACAAAGGAAAACAATGGCATGCCACTCACTAAATAGGGAATGTTCAAGAAATGGTGTTAGTTCTCCTTCCCATGTTTATTCCATCAAGAATCCATAG 927 0.3484 MLKKWFLSHSVGFINPKFKTLVQHFSFRYYCSTTTTTSSQSQSESEPDTNPLPVSYLINNFGFSHESALKVFNQKQVRFNTLEKPNSVITFFKTHGFSQSNIRTTIKKAPWLLSSKPNNKILPKFQFFLSKGVSSSDIVSLLTANPKILQSSLEKRIIPRFELLTRLFQQSPSIFGSTDLLKSLEEVKGLGFDPSMTTFVAALMAKKCMTKKLWNQKVDVFKKQGWSDEVVLQAFRSYPSLMLVSIDKFGEKGHSKGLNFTISFDESYMRKKWNLHTQRKTMACHSLNRECSRNGVSSPSHVYSIKNP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01807 308 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Trre3g01807 308 SMART mt_12 139 171 IPR003690 GO:0003690|GO:0006355
Trre3g01807 308 PANTHER CGI-12 PROTEIN-RELATED 54 250 IPR003690 GO:0003690|GO:0006355
Trre3g01807 308 Gene3D Transcription termination factor 3, mitochondrial 73 256 IPR038538 -
Trre3g01807 308 Pfam mTERF 90 247 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01807 Trre-Chr3 14620065 14621568 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01807 mTERF 1.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01807 K15032 - mtr:25488156 198.749