Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01805 ATGTTCAACAAATGTTTTCTCTCCCACAATCTTATCTTAGGCTTCATCACAACAAAATCAACAACCCCTAAATTTGAACCTCTTTTTCAACACTTTTCATTCCCAATTTCACTCAGATACTGCACCACCACAACAACAACAACAACAACAACAACACCATCATCATCAGAATCCGACACACCCCCATTTGCTGTATCATACCTCATCAACAATTTTGGTTTCTCATATGAATCAGCTCTCAGAGCTTTCAACAACAAACAGGTTCGTTTCAATACCCTTGAAAAGCCTAATTCAGTTATCTCTTTCTTTAAAAACCATGAATTTTCACACTCAAACATACGCAAAATCATCAAAAAAGAACCTTGGTTACTTTCATCAGAACCCCACAATGCAATTTTGCCAAAGTTTCAATTTTTTCTATCCAAAGGTGTTTCTTCTTCTGACATTGTTTCATTGTTGACAGCATACCCTAGAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCACTTTTTGAATTATTAAATAAGTTTATGAAAATCAATAAGAATATCATTGTTTGCTTAATTAAAAATTGGCCTTCATTTGTTGATAATCCCTATGACCTTATTGTGGCTAATATCAATTTGATAAGAGATTTTGGAGTATGTGATTCCGGCATAGCTAGATTGATTATGACAGGACCATCTATACTTGGTTTAACTGATTTGATTGATACTTTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAACTTCCACTTTTGTGATAGCTTTGGTTGCGAAGAAATGTATGAGTAAAAAACTTTGGGAAGAGAAAGTCGATGCCTTTAAGAAATGGGGTTGGTCGGATGAAGATGTTATAGAAGCATTTAAAAAGCAGCCTCATTGTATGTTAACATCCATTCATAAAATTAATTCAGTAATGAGCTTTTGGGTCGATCAGTTGGGTTGGGATGCTAGGGCCATTGTCAAATTACCAAGGGTTTTTGGGTCCAATCTAGAGAGAAGGATCATACCAAGGGCCGCAGTTCTGCAATATCTTCTGAAAAATGGTTTACTAAAAAAGAAAGCAAGCTTAACTACTCCATTTGTAGTCAGCGATAAGTTGTTCTTTGAAAGACATATAAACCGTTATACGGATGAATCATCTTATTTATTAAAGCTTTATGAAGAAAAACTTGATCTTGCCCACACCTGCGACAAAACTGATACTATGTCATGA 1227 0.3521 MFNKCFLSHNLILGFITTKSTTPKFEPLFQHFSFPISLRYCTTTTTTTTTTTPSSSESDTPPFAVSYLINNFGFSYESALRAFNNKQVRFNTLEKPNSVISFFKNHEFSHSNIRKIIKKEPWLLSSEPHNAILPKFQFFLSKGVSSSDIVSLLTAYPRILQSSLEKRIIPLFELLNKFMKINKNIIVCLIKNWPSFVDNPYDLIVANINLIRDFGVCDSGIARLIMTGPSILGLTDLIDTLEEVKGLGFDPSTSTFVIALVAKKCMSKKLWEEKVDAFKKWGWSDEDVIEAFKKQPHCMLTSIHKINSVMSFWVDQLGWDARAIVKLPRVFGSNLERRIIPRAAVLQYLLKNGLLKKKASLTTPFVVSDKLFFERHINRYTDESSYLLKLYEEKLDLAHTCDKTDTMS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01805 408 PANTHER CGI-12 PROTEIN-RELATED 63 381 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 FunFam Mitochondrial transcription termination factor-like 164 384 - -
Trre3g01805 408 Pfam mTERF 100 296 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 Pfam mTERF 266 372 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 Gene3D Transcription termination factor 3, mitochondrial 169 389 IPR038538 -
Trre3g01805 408 SMART mt_12 222 250 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 SMART mt_12 321 355 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 SMART mt_12 150 182 IPR003690 GO:0003690|GO:0006355
Trre3g01805 408 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01805 Trre-Chr3 14612995 14614221 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01805 mTERF 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01805 K15032 - mtr:25488156 375.941