Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01803 ATGTTGAATATCCATACCCACAAAACCTTTCTCTATCTCAAAGCCTTAGCATCACCACCATCCAACAAAAACCCATCATTATCCATTTCTCGCCATTTCAACAACAACACTTTCAACTCAACCTCATTTGCAGTTTCCTACCTCGTCAAAAATTTTGATTTCTCCCCACAATTTGCTTCCAAACTTTGCTCCACTTACAAGGTTCGTTTCAACACTGCCCAAAAACCTGATTATGTTCTCAACTTCTTAAGAAACAATGGTTTCTCAGAAACCCAATTAAGTAATATCATTTCCAGAACACCATGGTTACTTACCTGTGACCCTTTCATAAGAATCTTGCCAAAGTTTGAATTTTTACTATCCAAAGGTGCTTCTAAATCTGACATTGTTAAACTTGTCAGTAAGAACCCTTCGGTCCTGGCTCCAAGCTTGGAGAATCATATAGTCCCGAACTATGAATTGCTTTATAGATTCTTTAAATCAGATAAGAAAACTATTGCTTGTGTAATTGCAAATCCATATATACTTAGTGACTATTATGTGCCACAAAACATCGCGTTGTTGGTTCAGACTGGATTGCCAGACTCGAGTATTGAATTATTGCTTCGGAGGCAGTCTCGTACGTTGACTACGAATACACATTACATGCTGGAGTTCGTGCAGGAAGTGAAGGATTTGGGGTTTAATCCTTCAAAAATAACCTTTGGTGTAGCATTGGAAGCCAAACTAACCGTGAACAGAGCAATGTGGGAAGAAAAAGTCGATGCCTTTAAGAAGTGGGGGTGGTCTGATGAAGATGTTCTAGAAGCATTTAGATGGCAGCCTCAGTGTATGTTGGTATCCATTGAAAAGATTAATTTAGTGATGAGCTTTTGGGTCAATCAGATGGGTTGGGATGTGCTTGCCCTTGTAAAAGGACCGTCGGTTTTTTCAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTTGTGCAATTTCTGCTGAAGAAAGGTTTGCGAAGAAAGAATGCAAGCTTAACTTATCCATTTGTAGTGTCTGAGAAGTTGTTTCGTGACAAATATATAAACCGTTATGAGGAGGAGTCTTCTTATCTATTAAAGCTTTATGAAAAAAAAAACTGA 1125 0.384 MLNIHTHKTFLYLKALASPPSNKNPSLSISRHFNNNTFNSTSFAVSYLVKNFDFSPQFASKLCSTYKVRFNTAQKPDYVLNFLRNNGFSETQLSNIISRTPWLLTCDPFIRILPKFEFLLSKGASKSDIVKLVSKNPSVLAPSLENHIVPNYELLYRFFKSDKKTIACVIANPYILSDYYVPQNIALLVQTGLPDSSIELLLRRQSRTLTTNTHYMLEFVQEVKDLGFNPSKITFGVALEAKLTVNRAMWEEKVDAFKKWGWSDEDVLEAFRWQPQCMLVSIEKINLVMSFWVNQMGWDVLALVKGPSVFSNSLEKRIIPRASVVQFLLKKGLRRKNASLTYPFVVSEKLFRDKYINRYEEESSYLLKLYEKKN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01803 374 Gene3D Transcription termination factor 3, mitochondrial 181 369 IPR038538 -
Trre3g01803 374 Gene3D Transcription termination factor 3, mitochondrial 57 180 IPR038538 -
Trre3g01803 374 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 SMART mt_12 130 162 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 FunFam Mitochondrial transcription termination factor-like 144 363 - -
Trre3g01803 374 PANTHER CGI-12 PROTEIN-RELATED 40 361 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 Pfam mTERF 80 231 IPR003690 GO:0003690|GO:0006355
Trre3g01803 374 Pfam mTERF 244 351 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01803 Trre-Chr3 14604017 14605141 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01803 mTERF 2.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01803 K15032 - mtr:25488156 442.965