Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01798 ATGGGTTTTCATTTACCTAGTATTATCAAATCAAAGGCATCATCTTCAAAAGGTGTCCCAAAGGGATATCTAGCTGTGTATGTAGGAGAGGAAATGAAGAGGTTTGTGATTCCCGTATCATACTTGAACCAAATCTCATTCCAAGACTTACTTAGCCAATCTGAAGAACAATTCGGATTTGACCATCCAATGGGCGGCATCACTATTCCTTGCAGAGAAGATGTTTTCTTAGATATCACGTCTAGCTTGACTTGA 255 0.3922 MGFHLPSIIKSKASSSKGVPKGYLAVYVGEEMKRFVIPVSYLNQISFQDLLSQSEEQFGFDHPMGGITIPCREDVFLDITSSLT 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01798 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 83 IPR003676 GO:0009733
Trre3g01798 84 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01798 Trre-Chr3 14587139 14587393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01798 19 76 Calmodulin-binding Proteins AT3G43120 55.172 7.30e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01798 K14488 - gmx:112998524 120.938