Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01792 ATGCTACATCAACCCTTTTCATCATGTTCATATTCATCCATTTCTCCATTTTTTCCACTTCAAATCAAATCTAAATCTTTTCAATTGTTCAATACACCACCACCTTATCTCTATCTCAAAAACAACTTAACTTTCCCTCTTATCATCCATCATCACTTTCCATCACCATCTTCTCTGCATTCTTCCACCAACACTTCTGATAATTCAACCACTTTTGCAGTCTCTTACCTCATCAACACTTTTAACTTCTCCTCAAAATTTGCTTCCAAACTCTGCTCAACTTACGATATTCGTTTCCAAACTGCTGAAAACCCTGATTCTGTTCTCAACTTCTTCAAAAACAATGGTTTCTCAGAAACCCAATTGCGTTATATGATTCCCAAGGCACCATGGCTTCTTTCCTGCAATCTCTCCTTAAGGGTCATCCCAAAGTTTGAATTTTTACTCTCCAAAGGTGCTTCTAAATCTGACATTGTTAACATTGTTGGTAAGAACCCTATGGTTCTGTCTCCAAGCTTGGAGAATCATACAGTTCCAACCTATGAATTGTTATATAGATTCATGAAATCAGATAAGAAAACTATTGCTCTTGTAATTCACAAACCATATTTACTTACTTCACATACTGTGTCATATAACATCAATTTGTTGCTTGATATTGGAGTTAAGGACTCAACTATTATTAGATTGTTTGAGCTTCGGAACTGTACTCGGTTATTACAGACAAATCACTTGCCGAAGTTGGTGGAGGAATTAAAGAATTCAGGGTTTATTCCTTCAAAAACATTTTTTGTTATAGCATTGCTTGCAAAAACATCAGTTACAAAAAGATTATGGGAAGAGAAAGTTGATGCCTATAAGAAGTGGGGTTGGTCTGATGCAGATGTTTTAGAAGCATTTAAAAAGAATCCTTGTTGTATGTTAACATCCATTCATAAAATTAATTCAGTGATGAATTTTTGGGTCAATCAAATGGGTTGGGATGCTCGCGCCATTGCCAAAGCACCACATATTTTGTTGTTAAGTTTGGAAAAAAGGATCACTCCAAGGGCCCTCGTTGTGCAATTTTTGTTGGAGAGTGGTCTAATAAAAGAGAAGGCAAGCTTAACTTATCCACTTGTGGTGTCTGAGAATTTGTTTCGTGATGCGTATTTAAAACGTTTTAAGGAGGAGTCTTATCTATTAAAGTTGTACGAGGACAAACTCGATCTTGCATCCACAGACAAAAATGGCATGCGATGA 1242 0.3623 MLHQPFSSCSYSSISPFFPLQIKSKSFQLFNTPPPYLYLKNNLTFPLIIHHHFPSPSSLHSSTNTSDNSTTFAVSYLINTFNFSSKFASKLCSTYDIRFQTAENPDSVLNFFKNNGFSETQLRYMIPKAPWLLSCNLSLRVIPKFEFLLSKGASKSDIVNIVGKNPMVLSPSLENHTVPTYELLYRFMKSDKKTIALVIHKPYLLTSHTVSYNINLLLDIGVKDSTIIRLFELRNCTRLLQTNHLPKLVEELKNSGFIPSKTFFVIALLAKTSVTKRLWEEKVDAYKKWGWSDADVLEAFKKNPCCMLTSIHKINSVMNFWVNQMGWDARAIAKAPHILLLSLEKRITPRALVVQFLLESGLIKEKASLTYPLVVSENLFRDAYLKRFKEESYLLKLYEDKLDLASTDKNGMR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01792 413 PANTHER CGI-12 PROTEIN-RELATED 69 389 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 Gene3D Transcription termination factor 3, mitochondrial 190 393 IPR038538 -
Trre3g01792 413 FunFam Mitochondrial transcription termination factor-like 173 392 - -
Trre3g01792 413 Pfam mTERF 273 380 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 Pfam mTERF 109 314 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 SMART mt_12 195 223 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 SMART mt_12 329 363 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Trre3g01792 413 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01792 Trre-Chr3 14549732 14550973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01792 mTERF 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01792 K15032 - mtr:25488156 424.861