Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01791 ATGTTCAATACACCACCACCTTATCTTTATCTCAAAAACAACTTAACTTTCCCTCTTATCATCCATCACTACCCATCACCATCTTCTTTGCATTCTTCCACCAAAACTTGTGATTATTCAACCTCTTTTGCAGTCTACTACCTCATCAACACTTTTGACCTCTCCCCAAAATTAGCTTCCAAACTCTGCTTAACTTACTATATTTGTTTCGAGACTGCAGAAAAACCTGATTCTGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGATACCCAATTACGTTATATGATTCCCAAGGCACCATGGCTACTTTCCTGCAACCTCTCCTCAAGGGTCATCCCAAAGTTTGAATTTTTACTCTCCAAAGGTGCTTCTAAATCTGATATTGTTAATCTTATCAGTAAGTACCCTATGATTCTGTCTCCAAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTCATGAAATCGGATAAGAAAACTATTGCTCTTGTAATTAACAAACCATATTTACTTATTTTCCATCTTGTTTCACATAACATCAAAACGTTAGTTGATAGTGGAGTGCCGGACTTAACTATTACAAGGTTGCTTGAGCTTCGAAACCCATTTACTCGGTTATTTCATACAACTGAAATGCCGAAGTTGGTGGAGGAATTAAAGAATTTAGGGTTTGATCCTTTAAAAACAAATTTTGGTTTAGCATTGCTTGCTTGGGGAAAAAAACTATCATGGAATGAGAAAGTTGATGTATATAAGAAGTGGGGTTGGTCTGATGAAGATGTTTTAGAAGCATTTAGAAAGAATCCTTGTTGTATGTTAACATCCATTGATAAAATTAATTCAGTGATGGATTTTTGGGTCAATCAAATGGGTTGGGATGCTCGCGCCATTGCCAAAGCACCACATATTTTGCCGTTAAGTTTGGAAAAAAGAATCATTCCAAGGGCCCCCGTTGTGCAATTTATGCTGGAGAAAGGTTTGCGAAAAAAAAATGCAAGCTTAACTTATCCATTTTTTATGCATGAGAAGTTGTTTCGTGATGGATATTTAAAACGTCATAAGGAGGGGTCTTATCTATTAAAGTTGTATGATGAAAAACTCAATCTTGCATACACCGCCGACAAAAATGACATGCGATGA 1155 0.3636 MFNTPPPYLYLKNNLTFPLIIHHYPSPSSLHSSTKTCDYSTSFAVYYLINTFDLSPKLASKLCLTYYICFETAEKPDSVLNFFRNNGFSDTQLRYMIPKAPWLLSCNLSSRVIPKFEFLLSKGASKSDIVNLISKYPMILSPSLENHIVPTYELLYRFMKSDKKTIALVINKPYLLIFHLVSHNIKTLVDSGVPDLTITRLLELRNPFTRLFHTTEMPKLVEELKNLGFDPLKTNFGLALLAWGKKLSWNEKVDVYKKWGWSDEDVLEAFRKNPCCMLTSIDKINSVMDFWVNQMGWDARAIAKAPHILPLSLEKRIIPRAPVVQFMLEKGLRKKNASLTYPFFMHEKLFRDGYLKRHKEGSYLLKLYDEKLNLAYTADKNDMR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01791 384 PANTHER CGI-12 PROTEIN-RELATED 41 359 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 FunFam Mitochondrial transcription termination factor-like 144 362 - -
Trre3g01791 384 Gene3D Transcription termination factor 3, mitochondrial 62 362 IPR038538 -
Trre3g01791 384 Pfam mTERF 250 341 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 Pfam mTERF 80 274 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Trre3g01791 384 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01791 Trre-Chr3 14542793 14543947 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01791 mTERF 3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01791 K15032 - mtr:25488156 438.343