Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01775 ATGGCGTCTTCTTCAAAAAGATTAAGGAGATCTGGAGTAGGGAATAACAAAAAAAATTCCTTCAAGACTGTTATTTCACCAAACCAGGATAAGATTGAAATTTGTCCAAAATTTCGAGCTGCTTGGAATGATGAGTTACAGAATGATAACTGTGGATATTTGGTACATCCTACTGGAAATGCAGTATTCCTTGAACTACACCTAGAAGGGGGAAACTGTTACATGACTCCAGGAAAAGTTGTTTCAATTTTATTTGGAATTAGAGAACCTACGGAGGTTATTCTAACCTACAAAATCCATGACAATTTTTTTAATTTAAATTTTATCCAACAAGGTGTTATTGACATCTCAAGTGACGATGAATCGGATGATGAATATGTAATTCAATCCCATAATTATATTTTACATGCCTTTGAGAATGATGGTGTCTTTGGTTGGGAAAAGATAATGACTGAAGCTTCTGCAAATAACAAAAAAAATCAGGTTTTGCACATTCCACCACAAACAGCTGAGTATGTACTTAGAGGTAAGAAAAATATTACAATCAAAACTCTGCACAATTTAAATGGAACCAATTTGACCATCACAACTTACACAAGGCCAAATGGAAGGAAGGACATGTACTTCACTGAAGGATGGTATGAATTCAAGCAAGCTAACAGACTTGAAAAGGGAGACAAGCTGCAATTTAAACTTTCTGATCCACCTAAAGTAATTGTTATCAGCATTGTTCGCGAAAACAATTGA 747 0.3481 MASSSKRLRRSGVGNNKKNSFKTVISPNQDKIEICPKFRAAWNDELQNDNCGYLVHPTGNAVFLELHLEGGNCYMTPGKVVSILFGIREPTEVILTYKIHDNFFNLNFIQQGVIDISSDDESDDEYVIQSHNYILHAFENDGVFGWEKIMTEASANNKKNQVLHIPPQTAEYVLRGKKNITIKTLHNLNGTNLTITTYTRPNGRKDMYFTEGWYEFKQANRLEKGDKLQFKLSDPPKVIVISIVRENN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01775 248 MobiDBLite consensus disorder prediction 1 22 - -
Trre3g01775 248 SMART B3_2 149 247 IPR003340 GO:0003677
Trre3g01775 248 CDD B3_DNA 148 245 IPR003340 GO:0003677
Trre3g01775 248 Pfam B3 DNA binding domain 154 245 IPR003340 GO:0003677
Trre3g01775 248 SUPERFAMILY DNA-binding pseudobarrel domain 144 241 IPR015300 -
Trre3g01775 248 ProSiteProfiles B3 DNA-binding domain profile. 148 247 IPR003340 GO:0003677
Trre3g01775 248 Gene3D - 131 248 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01775 Trre-Chr3 14422480 14423716 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trre3g01775 B3 4.7e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01775 - K06016 tpra:123886203 227.254