Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01771 ATGATACACCAATCCTTTTCATCTTCGTCTTCATCTTCATATTCATCCATTTCTCCATTTTATCCACTTCAAATCAAATCTAAATCTTTTCAATTGTTCAATACACAACCACCTTATTTCTATCTCAACAACAACAACTTCACTTTCCCTCTTATCATCCATCACTTTCCATCACAATCTTCTCTGCATTTCTGCACCAACATTTCTTCTGATGATTCAACCTCTTTTGAAGTCTCCTACCTCATCAACAATTTTGAATTCTCCCCACAATTTGCTTCCAAACTCTGCTCAACTTACAAGGTTCGTTTCAAGACATCCCAAAACCCTGATTTAGTTCTAAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACGTTATATCATTTCCAAGGCACCAAGGTTACTTTCCTGTGACCCCTGCAAAAGGGTGTTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAAACTTGTCAGTAAGAACCCTATGATTCTGTCTCCAAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGCTTTATAGATTCTTGCAATCTGATAAGGACATTATTACTGGTGCAACTCATAATCCAGCTTTACTTAGTGACCATCTTGTGCCACAGAACATCACAATGTTGATTAAGAATGGAGTTACAGATTCAAGCATTGTAAGATTGTTTAGGACGCGGTCTCGATCGTTGAATACGAATACACGTTGTATGTTGAAGTTGGTGGAGGAATTGAAGGATTCGGGTTTTAATCCTTCGAAAATAACATTTGGTATAGCACTGGAAGCTAAACTAACCGTAAACAAAACATTGTGGAAAGAAAAAGTCGATTCCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTGATACAAGCATTTAGAAGGCAGCCTCATTGTATGTTGGTATCTGTTGATAAAATTAATTCAGTGATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATTCGCTTGCCCTTGCAATAGGACCATCGGTTTTTTCAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTTGTGCAATTTTTGTTGAAGAAAGGTTTGCGAAAAAAGAGTGCAAGCTTGACTTATCCATTTATAGTTGGCGATAAGATGTTCCGTGACAAATTTATAAACCGTTATGAGGAGGAGTCATCTTATCTATTAAAGCTTTATGAAGAAAAACTGACTCCTGCACAAACCAGGGACAAAACCGGCATGGACTCATGA 1263 0.3761 MIHQSFSSSSSSSYSSISPFYPLQIKSKSFQLFNTQPPYFYLNNNNFTFPLIIHHFPSQSSLHFCTNISSDDSTSFEVSYLINNFEFSPQFASKLCSTYKVRFKTSQNPDLVLNFFRNNGFSETQLRYIISKAPRLLSCDPCKRVLPKFQFLLSKGASNSDIVKLVSKNPMILSPSLENHIVPTYELLYRFLQSDKDIITGATHNPALLSDHLVPQNITMLIKNGVTDSSIVRLFRTRSRSLNTNTRCMLKLVEELKDSGFNPSKITFGIALEAKLTVNKTLWKEKVDSFKKWGWSDEDVIQAFRRQPHCMLVSVDKINSVMSFWVNQLGWDSLALAIGPSVFSNSLEKRIIPRASVVQFLLKKGLRKKSASLTYPFIVGDKMFRDKFINRYEEESSYLLKLYEEKLTPAQTRDKTGMDS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01771 420 PANTHER CGI-12 PROTEIN-RELATED 73 394 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 FunFam Mitochondrial transcription termination factor-like 177 396 - -
Trre3g01771 420 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 SMART mt_12 335 367 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 Gene3D Transcription termination factor 3, mitochondrial 176 402 IPR038538 -
Trre3g01771 420 Pfam mTERF 278 384 IPR003690 GO:0003690|GO:0006355
Trre3g01771 420 Pfam mTERF 113 263 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01771 Trre-Chr3 14399881 14401143 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01771 mTERF 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01771 K15032 - mtr:25488156 471.855