Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01765 ATGTTCATGATGATTATGATACACCAATCCTTTTCATCTTCGTCTTCATCTTCATATTCATCCATTTCTCCATTTTATCCACTTCAAATCAAATCTAAATCTTTTCAATTGTTCAATACACAACCACCTTATTTCTATCTCAACAACAACAACTTCACTTTCCCTCTTATCATCCATCACTTTCCATCACAATCTTCTCTGCATTTCTGCACCAACATTTCTTCTGATGATTCAACCTCTTTTGAAGTCTCCTACCTCATCAACAATTTTGAATTCTCCCCACAATTTGCTTCCAAACTCTGCTCAACTTACAAGGTTCGTTTCAAGACATCCCAAAATCCTGATTTAGTTCTAAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACGTTATATCATTTCCAAGGCACCAAGGTTACTTTCTTGTGACCCCTGCAAAAGGGTGTTGCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTAACTCTGACATTGTTAAACTTGTCAGTAAGAACCCTATGATTCTGTCTCCAAGCTTGGAGAATCATATTGTCCCAACCTATGAATTGCTTTATAGATTTTTGCAATCTGATAAGGAGATTATTACTGGTGCAACTCATAATCCAGCTTTACTTAGTGACCATCTTGTGCCACAGAACATCACAATGTTGATTAAGAATGGAGTTACAGATTCAAGCATTGCAAGATTGTTTAGGACGCGGTCTCGATCGTTGAATACGAATACACGTTGTATGTTGAAGTTGGTGGAGGAATTGAAGGATTCAGGTTTTAATCCTTCGAAAATAACATTTGGTATAGCACTGGAAGCTAAACTAACTGTAAACAAAACATTGTGGAAAGAAAAAGTCGATGTGATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATTCGCTTGCCCTTGCAATAGGACCATCGGTTTTTTCAAATAGTTTGGAAAAAAGGATCATTCCAAGGGCCTCAGTTGTGCAATTTTTGTTGAAGAAAGGGACAAAACCGGCATGGACTCATGATCAAGTTTTCAGCTATACTTGA 1059 0.373 MFMMIMIHQSFSSSSSSSYSSISPFYPLQIKSKSFQLFNTQPPYFYLNNNNFTFPLIIHHFPSQSSLHFCTNISSDDSTSFEVSYLINNFEFSPQFASKLCSTYKVRFKTSQNPDLVLNFFRNNGFSETQLRYIISKAPRLLSCDPCKRVLPKFQFLLSKGASNSDIVKLVSKNPMILSPSLENHIVPTYELLYRFLQSDKEIITGATHNPALLSDHLVPQNITMLIKNGVTDSSIARLFRTRSRSLNTNTRCMLKLVEELKDSGFNPSKITFGIALEAKLTVNKTLWKEKVDVMSFWVNQLGWDSLALAIGPSVFSNSLEKRIIPRASVVQFLLKKGTKPAWTHDQVFSYT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01765 352 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 SMART mt_12 308 340 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 SMART mt_12 237 267 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 FunFam Uncharacterized protein 78 218 - -
Trre3g01765 352 PANTHER CGI-12 PROTEIN-RELATED 294 339 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 Pfam mTERF 118 210 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 Pfam mTERF 215 340 IPR003690 GO:0003690|GO:0006355
Trre3g01765 352 Gene3D Transcription termination factor 3, mitochondrial 97 219 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01765 Trre-Chr3 14357176 14358701 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01765 mTERF 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01765 K15032 - mtr:25488156 346.28