Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01761 ATGCATGTTTCGCTTACACTTATCTTCTCTTCTGATATGTTTCTAACACACAACAATTCATGGAATTCTCCAATGCTGAAATCCCTATCCTTCAAACCCCTCTTTCTCAACCTAAATCAAATCACAACAATACCCTTCAAAACCCTAAAACTCAATTCTTCTCTATCAACCCTGTGTTTGAACCACAATTCCTCAACCACTTCACAACAAACCCAATTCAAAGCTTCAAAACTCGTTCAATTCGGGACTCCCGAAAAGTTCAATTCAGTAATCGATATCTTCAAAATCTACGGTTTTTCTGATACCCAGATAAACCAAATCGTTAAACAAGCACCCAATATTGTTAATTGTGACCCCAACAAAAGGATTTTGCCAAAGTTTGAATTTTTAAGCTCAAAAGGTGCTTCAAATTCGGAGATTGTGGAGATTGTTTGTAGAAGCCCTAGAATTCTTTATTCAAGTCTTGAGAATAATATAATTCCCACTTTTGAATTGGGGTCACTGATTCAAATATTAGATGTTTGCTGCTTAAAAGACCGTCGATATTATTGTGTAGTGATATGA 564 0.3564 MHVSLTLIFSSDMFLTHNNSWNSPMLKSLSFKPLFLNLNQITTIPFKTLKLNSSLSTLCLNHNSSTTSQQTQFKASKLVQFGTPEKFNSVIDIFKIYGFSDTQINQIVKQAPNIVNCDPNKRILPKFEFLSSKGASNSEIVEIVCRSPRILYSSLENNIIPTFELGSLIQILDVCCLKDRRYYCVVI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01761 187 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Trre3g01761 187 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Trre3g01761 187 Pfam mTERF 92 159 IPR003690 GO:0003690|GO:0006355
Trre3g01761 187 Gene3D Transcription termination factor 3, mitochondrial 51 176 IPR038538 -
Trre3g01761 187 PANTHER CGI-12 PROTEIN-RELATED 64 165 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01761 Trre-Chr3 14325570 14326245 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre3g01761 mTERF 3.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01761 K15032 - gmx:102666622 128.642