Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01750 ATGGAAAACATTATAAGATTTTCACTCGGGTTTTCTCTTCTTTGTATCCTCTACCTTGCTGCCACTGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACATACTACATGTATCAGCAACAACATAGACCCGAGGATAACAACATCGAGTTTTGGAGGAAGTTTGTCGCTGAATATTTTGCTCCCAATGCGAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTAGCAGTCAAACAACCGGAGTTTTCCCTCAGGTCGGTACCGAAGAAACCCTTATAATCAAATTATAG 291 0.4192 MENIIRFSLGFSLLCILYLAATAYEPGMCARRLTYYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSSQTTGVFPQVGTEETLIIKL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01750 96 PANTHER LIM DOMAIN-BINDING PROTEIN 22 85 IPR029005 -
Trre3g01750 96 Pfam LIM-domain binding protein 32 72 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01750 Trre-Chr3 14254091 14255106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01750 24 85 C2H2 Transcription Factor Family AT1G43850 88.710 8.76e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01750 - - dcr:108204197 136.732