Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01736 ATGCTTAGTCCTGAAGGTGAACTGAAAATAAGTTTCGGCTATCAATGCAATAGTCACAAAGGCATCCCTTGCAAAGTTGCCAATGGCTGCAAAGTCATCCCTGAATTCCGAAGAACGAGCAGTTTCTCTTGCTTGTCAGGTGCTGCCATAAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGAGAAGAAATCCTTCCGAATTTGGACTCTCCCAATTCATTTCGGCGGGTACCCTCTTCGCCAAATTTTGGAGAGACACTATCATCTTCTCTCCATAGTAGTTTGTCAAACCTAAGTTGCAGCCCGTCCAGTCCAAGTAATATGCTTGAAAATGACCCTTGTTCGTTAAGATTCACGAGCGCCCTTTCTAGAAATGATTGTTTCCATAATGCTACGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCCGAAGAAAAGGGGTGGCTTTTTTGTGCAATTTATGACGGCTTTAATGGGAGAGATGCAGCGGACTTTCTCGCTTGTACCCTTTATGACTCTATTGTATCTTACCTAAATACAATAGATTGGGATTCAAAACCAAATTCCATCAACAACGCTTCTGACAGCGAGTGTTTGGATGATAGTCGTATTCTTGACGGACGCCAATCTTCATCGAGTAAATCATTTTCGCATGTGGTACTTGATAACCTCAAACACATTCTTAGTCAGGTCGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTCTCAATTGGATCTTGTGTTTTACTCGTGCTTCTTCACGGGGATGATTTGTGTACACTCAATCTTGGGGACAGCAGAGCAGTGCTTGCGACATGCAGTACAAGTAACGGAATGAACGGGAATGAGAGATTGAAAGCTATTCAGCTTACCGATAGTCATACTGTTGACAATGAAGATGAAAGAACTCAACTTCTTGCTAGTCATCCTGATGATCCTAAGACCATTGTATCAGGGAGAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTAATGGGAATCCTTCGAGTTCGTGATCTTAAAAGTCCGCCATATGTTTCAACTGAACCATCACTGAATGTGCATAAGATCTCTACTTCTGATCAATTTGTTATAGTAGCAAGTGATGGTTTATTCGACTTCTTCAGCAATGAGGAAGCAGTAAATCTCGTCGAGTCTTACATCTTAAGCAATCCTGATGGTGATCCAGCTAAATTTCTCATTGAAGAATTAGTAACAAAAGCAGCTGATTCAGCAGGTTTCACCACGGAGGAGTTGATGAATGTTCCTGATGGGAGGAGGAGAAAGTATCACGATGATGTCACTGTAATGGTGATAATCCTTGGGATGAATAAACGAACTTCAAAGGCGTCAATTTGCATCTAA 1473 0.4168 MLSPEGELKISFGYQCNSHKGIPCKVANGCKVIPEFRRTSSFSCLSGAAISANATLANTNICNGVIGEEILPNLDSPNSFRRVPSSPNFGETLSSSLHSSLSNLSCSPSSPSNMLENDPCSLRFTSALSRNDCFHNATEVQVAGGAAGEDRVQAVCSEEKGWLFCAIYDGFNGRDAADFLACTLYDSIVSYLNTIDWDSKPNSINNASDSECLDDSRILDGRQSSSSKSFSHVVLDNLKHILSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGDDLCTLNLGDSRAVLATCSTSNGMNGNERLKAIQLTDSHTVDNEDERTQLLASHPDDPKTIVSGRVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLKSPPYVSTEPSLNVHKISTSDQFVIVASDGLFDFFSNEEAVNLVESYILSNPDGDPAKFLIEELVTKAADSAGFTTEELMNVPDGRRRKYHDDVTVMVIILGMNKRTSKASICI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01736 490 PANTHER PROTEIN PHOSPHATASE 2C 136 475 IPR015655 GO:0004722|GO:0006470
Trre3g01736 490 SMART PP2C_4 125 475 IPR001932 -
Trre3g01736 490 Pfam Protein phosphatase 2C 227 445 IPR001932 -
Trre3g01736 490 SUPERFAMILY PP2C-like 145 478 IPR036457 -
Trre3g01736 490 CDD PP2Cc 147 477 IPR001932 -
Trre3g01736 490 Gene3D - 104 486 IPR036457 -
Trre3g01736 490 ProSiteProfiles PPM-type phosphatase domain profile. 134 477 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01736 Trre-Chr3 14103852 14106043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01736 4 490 PP2C-type Phosphatase Gene Family AT3G16560 64.848 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01736 - - mtr:112419487 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01736 3 14103852 14106043 Trre3g01736 3 14103852 14106043 ECH
Trre15g04831 15 58571344 58573144 Trre3g01736 3 14103852 14106043 PCT