Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre3g01657 | ATGGGACAAGAATCAGATTACAAAACACAATTGGTATTAGATATATGTTCCATTTCCAAACGTTCAATTATATGTGTTCATACACTTTTCTCTAATACACCTTTCATTGATTGGTATTGCATTCTTGGTGTGTTAGAAAATGCAGGGTTTAATACCATTCGTAAGAAATACCATAAACTTGCTTTGCAACTTCATCCAGATAAGAATCAACACCCTAAGGCTGAAATTGCATTCAAACTTGTTTCTGAGGCATATGCATGTCTATCTGATGCTGCAAAAAGAAAAGCTTTTAATTTAGAGAGACAAAAGAGCTTCTGCATTAAGTGCAACAAAATCCCATATACATCCACCATTGTCCCTACTAATTCCAATGGTTCAAGTTTCAAGGCATGTAACATTATGAGCAAATCAATATCAAGTAAAGTTAGAAGAAACATTAGAGACATAAGAGAAAGATTCAAGGAAGAAGCTAAGGTGATAGAGAATTGTCTAAAGACAAATTCTGTGTCAAACAAAGAATCTCAACATAGAGTTGAGAAAGAAAGTCCTGTTTTCAATCCATCAAACTACAAATACCAAAGTTACCCTCATCCTAGGAGCAATGTTTACAAGAATTCCAAGACATATTGGTACTTGCAGACAGAAAATATGTTGCATAAAGATAAGGTGGGTGCTAAGGCTAAGTATACCTCCCCAGTTTTTGAGGTCAAATCAAGTAGTATGGACACAAGAAAATTTGCTTGTGTTTAA | 750 | 0.344 | MGQESDYKTQLVLDICSISKRSIICVHTLFSNTPFIDWYCILGVLENAGFNTIRKKYHKLALQLHPDKNQHPKAEIAFKLVSEAYACLSDAAKRKAFNLERQKSFCIKCNKIPYTSTIVPTNSNGSSFKACNIMSKSISSKVRRNIRDIRERFKEEAKVIENCLKTNSVSNKESQHRVEKESPVFNPSNYKYQSYPHPRSNVYKNSKTYWYLQTENMLHKDKVGAKAKYTSPVFEVKSSSMDTRKFACV | 249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre3g01657 | 249 | CDD | DnaJ | 37 | 90 | IPR001623 | - | |
Trre3g01657 | 249 | SMART | dnaj_3 | 36 | 93 | IPR001623 | - | |
Trre3g01657 | 249 | ProSiteProfiles | dnaJ domain profile. | 37 | 101 | IPR001623 | - | |
Trre3g01657 | 249 | Pfam | DnaJ domain | 37 | 98 | IPR001623 | - | |
Trre3g01657 | 249 | Gene3D | DnaJ domain | 36 | 158 | IPR036869 | - | |
Trre3g01657 | 249 | ProSitePatterns | Nt-dnaJ domain signature. | 78 | 97 | IPR018253 | - | |
Trre3g01657 | 249 | PANTHER | BNAC03G44070D PROTEIN | 23 | 221 | - | - | |
Trre3g01657 | 249 | PRINTS | DnaJ domain signature | 39 | 57 | IPR001623 | - | |
Trre3g01657 | 249 | PRINTS | DnaJ domain signature | 73 | 93 | IPR001623 | - | |
Trre3g01657 | 249 | PRINTS | DnaJ domain signature | 57 | 72 | IPR001623 | - | |
Trre3g01657 | 249 | SUPERFAMILY | Chaperone J-domain | 27 | 99 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre3g01657 | Trre-Chr3 | 13281449 | 13283127 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre3g01657 | 37 | 98 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 40.909 | 4.34e-08 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre3g01657 | - | - | gmx:100801809 | 343.199 |