Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01657 ATGGGACAAGAATCAGATTACAAAACACAATTGGTATTAGATATATGTTCCATTTCCAAACGTTCAATTATATGTGTTCATACACTTTTCTCTAATACACCTTTCATTGATTGGTATTGCATTCTTGGTGTGTTAGAAAATGCAGGGTTTAATACCATTCGTAAGAAATACCATAAACTTGCTTTGCAACTTCATCCAGATAAGAATCAACACCCTAAGGCTGAAATTGCATTCAAACTTGTTTCTGAGGCATATGCATGTCTATCTGATGCTGCAAAAAGAAAAGCTTTTAATTTAGAGAGACAAAAGAGCTTCTGCATTAAGTGCAACAAAATCCCATATACATCCACCATTGTCCCTACTAATTCCAATGGTTCAAGTTTCAAGGCATGTAACATTATGAGCAAATCAATATCAAGTAAAGTTAGAAGAAACATTAGAGACATAAGAGAAAGATTCAAGGAAGAAGCTAAGGTGATAGAGAATTGTCTAAAGACAAATTCTGTGTCAAACAAAGAATCTCAACATAGAGTTGAGAAAGAAAGTCCTGTTTTCAATCCATCAAACTACAAATACCAAAGTTACCCTCATCCTAGGAGCAATGTTTACAAGAATTCCAAGACATATTGGTACTTGCAGACAGAAAATATGTTGCATAAAGATAAGGTGGGTGCTAAGGCTAAGTATACCTCCCCAGTTTTTGAGGTCAAATCAAGTAGTATGGACACAAGAAAATTTGCTTGTGTTTAA 750 0.344 MGQESDYKTQLVLDICSISKRSIICVHTLFSNTPFIDWYCILGVLENAGFNTIRKKYHKLALQLHPDKNQHPKAEIAFKLVSEAYACLSDAAKRKAFNLERQKSFCIKCNKIPYTSTIVPTNSNGSSFKACNIMSKSISSKVRRNIRDIRERFKEEAKVIENCLKTNSVSNKESQHRVEKESPVFNPSNYKYQSYPHPRSNVYKNSKTYWYLQTENMLHKDKVGAKAKYTSPVFEVKSSSMDTRKFACV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01657 249 CDD DnaJ 37 90 IPR001623 -
Trre3g01657 249 SMART dnaj_3 36 93 IPR001623 -
Trre3g01657 249 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
Trre3g01657 249 Pfam DnaJ domain 37 98 IPR001623 -
Trre3g01657 249 Gene3D DnaJ domain 36 158 IPR036869 -
Trre3g01657 249 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Trre3g01657 249 PANTHER BNAC03G44070D PROTEIN 23 221 - -
Trre3g01657 249 PRINTS DnaJ domain signature 39 57 IPR001623 -
Trre3g01657 249 PRINTS DnaJ domain signature 73 93 IPR001623 -
Trre3g01657 249 PRINTS DnaJ domain signature 57 72 IPR001623 -
Trre3g01657 249 SUPERFAMILY Chaperone J-domain 27 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01657 Trre-Chr3 13281449 13283127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01657 37 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 4.34e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01657 - - gmx:100801809 343.199