Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre3g01629 | ATGAGTGGTAGTTCATCTAATAACCACATAATAAACAATGAAGAGCAACCTTCCTCTTCTTCCTCATCAACCTTGAAGCTATTTGGTTTCTCATTAACACCATCTAAAACCGTTCCTTATAAAACCAAGAAATTCATATGCCACTTTTGTCGCCGTGAATTTTCCAATTCTCAAGCGTTAGGAGGCCATCAAAATGCTCATAAGAGAGATCGCCAAAGAGCACATTTTCTTTCCATTCTTCCTCATCATCAACGCTTTGTACCATGTTCACCTTATCGTCCTATGATAGCACCACATGGAACACCTAGAGTAGTGTTTTTGCATCCACACCGCCGGTCACCGGAAGCAATATGGAATACACAACATTATGAAGAGGAGCCTAATGAGAATCCTTTCAATGCAACCACATCCACAAATAATGAATCTTTCATGCAAGTACACAATAATATTATTGATGGTGATGTTGATCTTAATTTGACTCTAGCTTGTGCACCTTTAATTTCCAAGGACAAAGAGTTTGAAAGAGAGTGA | 531 | 0.3861 | MSGSSSNNHIINNEEQPSSSSSSTLKLFGFSLTPSKTVPYKTKKFICHFCRREFSNSQALGGHQNAHKRDRQRAHFLSILPHHQRFVPCSPYRPMIAPHGTPRVVFLHPHRRSPEAIWNTQHYEEEPNENPFNATTSTNNESFMQVHNNIIDGDVDLNLTLACAPLISKDKEFERE | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre3g01629 | 176 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 72 | IPR036236 | - | |
Trre3g01629 | 176 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Trre3g01629 | 176 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 47 | 67 | IPR013087 | - | |
Trre3g01629 | 176 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 45 | 72 | IPR013087 | - | |
Trre3g01629 | 176 | PANTHER | ZINC FINGER PROTEIN 5 | 14 | 162 | IPR044299 | GO:0010090 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre3g01629 | Trre-Chr3 | 13024861 | 13025391 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre3g01629 | 19 | 88 | C2H2 Transcription Factor Family | AT1G67030 | 42.045 | 6.70e-14 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre3g01629 | - | - | tpra:123887517 | 310.071 |