Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01628 ATGGGAGTTGAAAAAGAAGGGACTAAAAATGGAGGTAGTTTTTTCCACTTGTTTGATTGGACCTCGAAATCGCGGAAGAAATTATTTGCATCTAAATCAGATTTACCAGAATCGTTGAAACATGAAAGAAAAGCCAACCACAATGTGGCAATGAGACATCCCTATCTGGTCGATGAAGACGAAAATGGTGTAGGGGAATATGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAAGTGACGATACATGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTAGATTCTCTGCCTTCTTCTGGTTTCTCTGATCCTTACTCGACGCCGTATTTTGATACGAGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGAAGGAACTTCTAGCAACTTCGTCGAGCCAAAGCCTCAAAAGGCTATTACAAGGCCGATTGAAAAGTTTCAAAGAGAAGTGTTGCCTCCGAAGTCGGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCTGGCTTTGTTCCATCCAACAATGCTGCTTATATTATGGAGGCTGCAGCGAGAATTATTGAACCTGGATCCTCCCAAGCAAAGGCTAAAACACATATGGCGGCATCATCGATAGTCTCGCTGAGAGTAAAAGATGTTAGAGATAAGTTGGATTCTTCGCAAAAGGCACCTCTAATTGCGACATCTTCGGTAGCTTTTAGGACTCGAGAGCTAAAAGAAAAAAGAGATATTTCTCAAAGAACAAGCAGGGTTTCAGAACGTTCTCAAAGGTCATCAGCCGAGTCGAATGCTGCAAAGTATTTAAAGGGACAATCTTTGAATAGAAGCTGGAATGGAACTGCGGAAACATCTGTGAAGTCTCCTACGCATGCAGAAGAAGACTCTTCTTTGAAGAATAAAGGGAAGTCTGTTTCGCTTGCGGAAACATCTGTGAAGTCTCCTACACATGCAGAAGAAGATTCTAATTTGAAGAATAAAGGGAAGTCTGTCTCGCTTGCAATCCAAGCAAAGGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAACTTGATGGGCCAAAAAGAGCATCTCGACATTAAATACAATCAGCCACTACCTAAGGCAAATGCTCAGAAAAATTTGCATAGGAAATCTTCTGGCCAGAATTCTTCGAATGTTCTGAGGCAGAATAATCTGAAACAGAACCATTCGATTGATAATAACGACAAGTTAGCACCATCTAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTACGAGTGGAGATTCCCCTTATGGACGACACAGAAGTTCTAGTAGTAAATCCACTGCAAAATCTAAAGTCGGATCGAGAAAGTCAGCCGTGGAGGTGACAGATAGCGAAAACGAAATTCTATACACCAGCACAAACAGTTTTCCTAGAAAGAAAAGGACTACGGACAAGGACTGGAACGATAGAGTTGTCGATAATTTGTTCATCGACAAAACTCCAAAGTCTGTTAAGTCGAATCTATCAAGTAATAAACAATATGGTTGGTCTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTCACTACACCATTAACAAGGAACAGCAATCCAGGTTCTGAGACACCTCGACAAGATGGAAAGAATACTAACGATCTTTCATTGGATCAACGCATCAAAAGAGTGTTACTCGATGCAGACAATACAAGGTCTCCAATAGGATACAATGTAATCGGTGGTGATGCCTTAGGTATTCTTTTAGAACAGAAGTTGAGGGAATTGAGTCAATTGACAAGTGGAGTTGAAACCTCTTCCATTACGGCACCAAAGTCAATTGATCAAGTAACCAACTTCAATATAGTTAACCTCAACCCGAGATTGGAGCAAAAGAAAGACCAAGATATGTCATTTACAGAATGTTTAAGTGGTAGCCGTGGTTCTGACATGTCCTTCACCAATCTTCCAGAATCATCCTTGAAACATAAATCATGGGGTGATGAGATGGAACCATTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCATCTTTTTCGATCGAAAGCTGTGAATCTTCGATGAGCACTGACGTTACTAGTACAGAAGGAAGCAAAATGTTTTCGTCTCTTCAAGCTCAAGAAATCCATGGCTTTAATTTTTCAAGGAAGTTCTATCCTACCGAATGTGATGCAGAGTTATCTGACTCGGCTTCTTCAACATCAACTAGGACTATGATGAAGAAGCAGAATAGTACATTTTCTGCGATGAAGTTTGGTAGATCATCAAGTACATGGGAGCTAGACTATGTGAAAGAGATACTATGTAATGTTGAGTTGATGTATATGGATTTTTCACTCGGCCGAACTCGCGAGGTAGTTAACTCTCATATGTTCAACCAGTTGGAAAGCCGAAAAGGAGGTTTCAAGATCGACGATGAATCAAGGATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAGAAGTTATGTAGGAGGAGGGTACAAAATGTGGATTAAAGGGTTTGATATGGTAAGAAGAAAAGATTGGTTGGCAAAAGATGTGTACAAGGAAATTTTGGGTTGGAAAGGGATGAGGGATTCAATGGTTGATGAACTTGTGGACAAGGATATGAGTAGCCAATATGGAAAGTGGTTGGATTTGGATTATGAGGTTGATGCTTATGATTTTGGAGAAGAAGTTGCTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGAAATGTTGCAATTTTAA 2841 0.3981 MGVEKEGTKNGGSFFHLFDWTSKSRKKLFASKSDLPESLKHERKANHNVAMRHPYLVDEDENGVGEYVRGSCDHSYASSVTSDDTCGTRAPNVVARLMGLDSLPSSGFSDPYSTPYFDTRSLQDSQFLYSGKLVEKVEGTSSNFVEPKPQKAITRPIEKFQREVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKTHMAASSIVSLRVKDVRDKLDSSQKAPLIATSSVAFRTRELKEKRDISQRTSRVSERSQRSSAESNAAKYLKGQSLNRSWNGTAETSVKSPTHAEEDSSLKNKGKSVSLAETSVKSPTHAEEDSNLKNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHLDIKYNQPLPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSIDNNDKLAPSKPLVSNSQGRKVTSGDSPYGRHRSSSSKSTAKSKVGSRKSAVEVTDSENEILYTSTNSFPRKKRTTDKDWNDRVVDNLFIDKTPKSVKSNLSSNKQYGWSEEVKKKDMDVVSFTFTTPLTRNSNPGSETPRQDGKNTNDLSLDQRIKRVLLDADNTRSPIGYNVIGGDALGILLEQKLRELSQLTSGVETSSITAPKSIDQVTNFNIVNLNPRLEQKKDQDMSFTECLSGSRGSDMSFTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSIESCESSMSTDVTSTEGSKMFSSLQAQEIHGFNFSRKFYPTECDAELSDSASSTSTRTMMKKQNSTFSAMKFGRSSSTWELDYVKEILCNVELMYMDFSLGRTREVVNSHMFNQLESRKGGFKIDDESRIERKVIFDCVSECLDLRCRSYVGGGYKMWIKGFDMVRRKDWLAKDVYKEILGWKGMRDSMVDELVDKDMSSQYGKWLDLDYEVDAYDFGEEVADQIFNSLVDDVVYEMLQF 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01628 946 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 941 - -
Trre3g01628 946 MobiDBLite consensus disorder prediction 418 468 - -
Trre3g01628 946 Pfam Domain of unknown function (DUF4378) 786 938 IPR025486 -
Trre3g01628 946 MobiDBLite consensus disorder prediction 546 567 - -
Trre3g01628 946 MobiDBLite consensus disorder prediction 270 305 - -
Trre3g01628 946 MobiDBLite consensus disorder prediction 257 347 - -
Trre3g01628 946 MobiDBLite consensus disorder prediction 546 570 - -
Trre3g01628 946 MobiDBLite consensus disorder prediction 418 475 - -
Trre3g01628 946 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01628 Trre-Chr3 12984961 12988413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01628 12 944 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.801 3.44e-92 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01628 - - tpra:123885644 1765.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01628 3 12984961 12988413 Trre3g01628 3 12984961 12988413 ECH