Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01591 ATGGAAAACTTGTGCAATTTTGGTGAGATCAGTTTCAGTGCAATTGAGGACAAACTTAGTTCATCCAATGATACTTTCTGGCATACCAAGAAACTTACTGAAATGAAAAATGCTCACTTTTCTTTAGCAGAAGATAAAGGAAACTATAATGGCATTGAGTCTCTTTGCTCTAATTTTGGTTTCTTTCAAGATGATGAGTTACTCACTAATCAACAAAAGTTTCATCATCAACAGCAATCATATCAAGATTATGAACCTTTCGATAATCTACGATTTGATATGGTTCAATTTGATGAACAGTTTGAAACCAAAAATCTTCCACTTTGTGACACAAAAAAGGACAAACAATATTACCAAACAACTCCTTTAGCGGCACCAGTTGAAATATTGAAGAATTATGGCAAAGGATTCAAGAGATTATCACCTGACGAAGGAAAAATCCTTCATCCTGTCGATGATTTTGGTTTAGTCACAGATAATGAAAACGAGAGAAAGTTGTCGACTACAGATATCATGAAGATAGCTGGAACTAAGTTCATACAATCATCAGATTCTGCATCAGGTTTGATTCTTAATCACCCTTTTGGTTTTTCTTTCTCCGGTTTATCCGATGAAGAGAAAGAAGATATTTCACTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTTGGATATCAACAATTTGAACGCGCTAGAAAAGTGTTATCGCAAATTGAGTCTTTATCTTCGAAGACAGGTAACCCAGTTAAGCGCGTGGTTCATTACTTTGCCGAAGCTCTTCGCCGGAGAATCGACAAAGAAACTGGTAGAGTATCTATTAACAATATGCAAAAGAAGGAATCTTTATTTGATCCTGAGGTGGAAACCAAGGATCTAAATCCGACCCTTCTTGCGTTTATTGAAGATCTTCCATTTTGTAAAGTTGCAATGTTCACATGTGTACAAGCTTTAATAGAAAATGTAACTGATGCAAAGAAAATTCATGTTATTGATCTCGCAATTCGAAACGGGTCACAGTGGACAATCCTAATGCAAGCACTTCAATCGAGAAACGAATGTCCAGTCGAGCTTCTAAAGATAACAGCTATTGTGACCGGAAACACAGACACTTCAAAGCTTGTAGTCGAGGACACTGGTAAGAGATTGAAGGATTTTGCGCAAAGTATGAACATACCTTTTTTATTTGAAATAGTTATTGTATCTGATTTGTTACATCTAAGAGAAGATCATTTTAAGATAGATTCAGACGAAACTATTGCGGTTTATTCTCAGTTTGCGCTTCGATGCAAGATTCAACAATCAGACCAACTTGAAACAGTTATGAGAGTGATTAGAACTATAAATCCTATAGTAATGGTTGTCGCGGAGATTGAAGCAAATCACAATTCTAAATCTTTTGTGAACCGTTTCATCGAAGCACTTTTCTACTTTAGTGCACTTTTCGATTGTTTGGAGGATTGTATGAAAGGCAATGAGAAAAATAGAATTATTATGGAATCAATGTATTTTAGTCATGGTATAAGGAATAATGTAGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTTACAAGATTTGGTATGGTGGAGACAGAATTGAGTATGATGTCTTTGTATCAAGCTGAATTGGTTGCTAAAAGATTTCCTTGTGGAAGTTCTTGCACATTTGATATGAATGGACATTGTCTTATTGTTGGATGGAAGGGAACACCAATTAACTCTGTGTCTGTTTGGAAATTCATTTGA 1773 0.357 MENLCNFGEISFSAIEDKLSSSNDTFWHTKKLTEMKNAHFSLAEDKGNYNGIESLCSNFGFFQDDELLTNQQKFHHQQQSYQDYEPFDNLRFDMVQFDEQFETKNLPLCDTKKDKQYYQTTPLAAPVEILKNYGKGFKRLSPDEGKILHPVDDFGLVTDNENERKLSTTDIMKIAGTKFIQSSDSASGLILNHPFGFSFSGLSDEEKEDISLAESLLACAEKVGYQQFERARKVLSQIESLSSKTGNPVKRVVHYFAEALRRRIDKETGRVSINNMQKKESLFDPEVETKDLNPTLLAFIEDLPFCKVAMFTCVQALIENVTDAKKIHVIDLAIRNGSQWTILMQALQSRNECPVELLKITAIVTGNTDTSKLVVEDTGKRLKDFAQSMNIPFLFEIVIVSDLLHLREDHFKIDSDETIAVYSQFALRCKIQQSDQLETVMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSALFDCLEDCMKGNEKNRIIMESMYFSHGIRNNVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMMSLYQAELVAKRFPCGSSCTFDMNGHCLIVGWKGTPINSVSVWKFI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01591 590 ProSiteProfiles GRAS family profile. 203 588 IPR005202 -
Trre3g01591 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 578 IPR005202 -
Trre3g01591 590 Pfam GRAS domain family 213 588 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01591 Trre-Chr3 12613418 12615190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01591 202 589 GRAS Transcription Factor Family AT3G03450 31.139 7.35e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre3g01591 GRAS 2.9e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01591 - - gmx:100798926 738.413