Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01589 ATGAAATTCATCAACAATAATATTAACCTCAAATTCTTTTACATAATCCTAATAAGTTTTGCATTAGAAAAATGCATGGCTCACACATTCATGGACTCACCAAGCGTTGTTGAAACAAGAACTCGTAGTCATTCGGCGAATCCACCAACACAATCTTCAGAAGCGCCTTCTGATGCGCCTTCTGAAGCGCCTACTGAGTCAAACTCTGATTTTCCCGAAATTCCAAACTTTGCATTAGGATCAGAATCGGGACAAGACACTGGTGATTCAGCTTCCTTCAAAGATGCAATCTCCGACATTCTCAAAGGATCCTTGTTCGGAAATTCCATATCAATGCCTACGCAACCTCACCACATATCCGAAGCAAAACAAAGCACCCTCGGACTAGACCAAATATGTATGCACACGGATTACCCCGATGTTTGTATGACAACAATTAAACCTCTTGTAAGTCAAAATTTCGAAATAATTGATGTCCTCGCTGCCGCCATAAAAGTTTGTTCGATTGAAGTAAAGTTGACAATAACAAAAGTGGCTAGACATGCCGCGAATAATCCGGAAGTTGCTAACGCAGTTTCTGAATGTCAAGAGCAATACAAAATTGCTTCAGAAAATCTTCAAAGAGCAATGAAAGCTATTCAGTCGCGTGATCTTGGTACCATTACCGTTATGCTTAGTGCTGTTATGGCCGATGTTTCAACATGCGAGAGCGCTTTTGAGGATCTAAGAAAATCGCCTTCTTCCGACATGACTAAAACTGATGGTTTAGTTACTATTACTGTTAGCAATTGTCTCTCCATTGCTAATTTGATTCCCTATTAA 822 0.399 MKFINNNINLKFFYIILISFALEKCMAHTFMDSPSVVETRTRSHSANPPTQSSEAPSDAPSEAPTESNSDFPEIPNFALGSESGQDTGDSASFKDAISDILKGSLFGNSISMPTQPHHISEAKQSTLGLDQICMHTDYPDVCMTTIKPLVSQNFEIIDVLAAAIKVCSIEVKLTITKVARHAANNPEVANAVSECQEQYKIASENLQRAMKAIQSRDLGTITVMLSAVMADVSTCESAFEDLRKSPSSDMTKTDGLVTITVSNCLSIANLIPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01589 273 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 130 271 IPR035513 -
Trre3g01589 273 SMART PMEI_2 124 267 IPR006501 GO:0004857
Trre3g01589 273 MobiDBLite consensus disorder prediction 39 90 - -
Trre3g01589 273 Coils Coil 192 212 - -
Trre3g01589 273 NCBIfam pectinesterase inhibitor domain 106 269 IPR006501 GO:0004857
Trre3g01589 273 Gene3D Invertase/pectin methylesterase inhibitor family protein 128 271 IPR035513 -
Trre3g01589 273 Pfam Plant invertase/pectin methylesterase inhibitor 130 267 IPR006501 GO:0004857
Trre3g01589 273 PANTHER PECTINESTERASE INHIBITOR-LIKE 111 271 - -
Trre3g01589 273 CDD PMEI-like_2 129 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01589 Trre-Chr3 12602251 12603072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01589 121 270 Carbohydrate Esterase AT5G49180 25.000 7.02e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01589 - - psat:127074109 286.189